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370 results for “plant material”
Data from 'Tracability of Forest Reproductive Material with the quality label 'Plant van Hier': A DNA database with genetic profiles of native autochthonous tree and shrub species of Flanders, Belgium'
<h2>Background</h2> <p>Indigenous trees and shrubs play an important role in multifunctional forest management. They form a significant part of the biodiversity in our forests. Forest reproductive material (FRM) of autochthonous Flemish origin is sold under the quality label ‘Plant van Hier’, a certification mark of the Agency for Nature and Forests. To ensure the provenance of the seedlings, we developed a DNA-database of genetic profiles of potential parent trees, using species-specific genetic markers. This database enables the traceability of FRM of the ‘Plant van Hier’ label throughout the entire production chain; from seed harvesting and cultivation to planting by the end user.</p> <p>This database contains the genetic profiles of almost all possible parent trees present within 27 Flemish autochthonous seed orchards of eight ecologically important tree and shrub species: <em>Carpinus betulus</em>, <em>Corylus avellana</em>, <em>Frangula alnus</em>, <em>Populus tremula</em>, <em>Sorbus aucuparia</em>, <em>Tilia cordata</em>, <em>Tilia platyphyllos,</em> and <em>Ulmus laevis</em>. The profiles were established using microsatellite markers (11 to 24 markers per species). New genetic markers were developed for <em>Carpinus betulus</em> and <em>Ulmus laevis</em>. PCR products were run on an ABI 3500 Genetic Analyser (Thermo Fisher Scientific).</p> <h2>Files</h2> <p>The files will be updated when new genotypes are added to the seed orchards. The current data files contain data from genotypes collected in the period 2018-2023. </p> <h3>Species_genotypes</h3> <p>These files contain the genetic fingerprints of the parent trees of autochthonous Flemish seed orchards. Missing data is indicated as ‘MD’. For <em>Carpinus betulus</em>, an octoploid species, the allelic phenotype is given instead of the genotype as the number of times that an allele occurs on a specific locus is not known.</p> <p>The next metadata is additionally given:<br>- Species: the Latin name of the species<br>- Seed_orchard: the name of the seed orchard in which the genotypes are located<br>- Code_seed_orchard: the code of the seed orchard in which the genotypes are located as given in the Register of Flemish Forest Reproductive Material (‘Register bosbouwkundig uitgangsmateriaal’; inbo.be)<br>- Genotype: the fieldname given to the genotype<br>- Origin: the location where the genotype was collected in Flanders, Belgium. Genotypes were collected from natural stands which are assumed to have an autochthonous origin. When the specific location is unknown, the location ‘Flanders’ is given. <br>- Year_sampled: the year in which the genotypes were sampled in the respective seed orchard for genetic analysis.</p> <h3>Species_binsets</h3> <p>These files contain the binsets and allele names that are used to score the alleles of the genotypes in the programme Geneious Prime 2019.3.2 (<a href="https://www.geneious.com">https://www.geneious.com</a>). For <em>Tilia platyphyllos </em>and <em>Tilia cordata</em>, the same binsets were used.</p>
Supplementary material 3 from: Bongard C, Butler K, Fulthorpe R (2013) Investigation of fungal root colonizers of the invasive plant Vincetoxicum rossicum and co-occurring local native plants in a field and woodland area in Southern Ontario. Nature Conservation 4: 55-76. https://doi.org/10.3897/natureconservation.4.3578
Supplementary material 3 from: Bongard C, Butler K, Fulthorpe R (2013) Investigation of fungal root colonizers of the invasive plant Vincetoxicum rossicum and co-occurring local native plants in a field and woodland area in Southern Ontario. Nature Conservation 4: 55-76. https://doi.org/10.3897/natureconservation.4.3578
Supplementary Material for "Invasive plants are associated with increased fire frequency but decreased burn severity in Southern California shrubland ecosystems"
<p>This Zenodo repository contains all data, scripts, and supplementary materials for the manuscript entitled, "Invasive plants are associated with increased fire frequency but decreased burn severity in Southern California shrubland ecosystems".</p>
Supplementary material: Efficient in vivo screening method for the identification of C4 photosynthesis inhibitors based on cell suspensions of the single-cell C4 plant Bienertia sinuspersici
<p>Data described in Minges et al. (2019) Efficient <em>in vivo</em> screening method for the identification of C<sub>4</sub> photosynthesis inhibitors based on cell suspensions of the single-cell C<sub>4</sub> plant <em>Bienertia sinuspersici</em>. doi: <a href="https://doi.org/10.3389/fpls.2019.01350">10.3389/fpls.2019.01350</a></p> <p> </p>
Supplementary material 1 from: Spafford R, Lortie C, Butterfield B (2013) A systematic review of arthropod community diversity in association with invasive plants. NeoBiota 16: 81-102. https://doi.org/10.3897/neobiota.16.4190
Supplementary material 1 from: Spafford R, Lortie C, Butterfield B (2013) A systematic review of arthropod community diversity in association with invasive plants. NeoBiota 16: 81-102. https://doi.org/10.3897/neobiota.16.4190
Supplementary material 1 from: Bongard C, Butler K, Fulthorpe R (2013) Investigation of fungal root colonizers of the invasive plant Vincetoxicum rossicum and co-occurring local native plants in a field and woodland area in Southern Ontario. Nature Conservation 4: 55-76. https://doi.org/10.3897/natureconservation.4.3578
Supplementary material 1 from: Bongard C, Butler K, Fulthorpe R (2013) Investigation of fungal root colonizers of the invasive plant Vincetoxicum rossicum and co-occurring local native plants in a field and woodland area in Southern Ontario. Nature Conservation 4: 55-76. https://doi.org/10.3897/natureconservation.4.3578
Supplementary material 2 from: Spafford R, Lortie C, Butterfield B (2013) A systematic review of arthropod community diversity in association with invasive plants. NeoBiota 16: 81-102. https://doi.org/10.3897/neobiota.16.4190
Supplementary material 2 from: Spafford R, Lortie C, Butterfield B (2013) A systematic review of arthropod community diversity in association with invasive plants. NeoBiota 16: 81-102. https://doi.org/10.3897/neobiota.16.4190
Text-fig. 1. A. Location of the sites of Capo di Fiume, Palena and Pollenzo near Alba. B. Capo di Fiume stratigraphic section. Facies of coastal-transitional marine associations – a. Freshwater marsh and tidal creeks interval, b. Swamp interval, c1–c4. Facies of eustarine bay associations, d1–d6. Facies of open shelf marine associations. Symbols: "black star" – fossiliferous horizon with plant material studied here, 1. mottled grey to dark-brown marls and clayey marls, 2. fissile dark-grey marls and shaly marls, 3. limestones, 4. marly limestones and limey marls, 5. bio-lithoclastic calcarenites, 6. lime conglomerate, 7. massive muddy deposit produced by mass-flow mechanism, 8. diatomitic marls, 9. "terra rossa" soil (modified after Carnevale et al. 2011). in Feather Palm Foliage From The Messinian Of Italy (Capo Di Fiume, Palena And Pollenzo Near Alba) Within The Framework Of Northern Mediterranean Late Miocene Flora
Text-fig. 1. A. Location of the sites of Capo di Fiume, Palena and Pollenzo near Alba. B. Capo di Fiume stratigraphic section. Facies of coastal-transitional marine associations – a. Freshwater marsh and tidal creeks interval, b. Swamp interval, c1–c4. Facies of eustarine bay associations, d1–d6. Facies of open shelf marine associations. Symbols: "black star" – fossiliferous horizon with plant material studied here, 1. mottled grey to dark-brown marls and clayey marls, 2. fissile dark-grey marls and shaly marls, 3. limestones, 4. marly limestones and limey marls, 5. bio-lithoclastic calcarenites, 6. lime conglomerate, 7. massive muddy deposit produced by mass-flow mechanism, 8. diatomitic marls, 9. "terra rossa" soil (modified after Carnevale et al. 2011).
Fig. 47 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)
Fig. 47. Isolectotype of Carex capricornis Meinsh. ex Maxim. var. capitata Maxim. (LE 01012320; KPMNX0001323).
Fig. 46 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)
Fig. 46. Lectotype of Carex capricornis Meinsh. ex Maxim. var. capitata Maxim. (LE 01012319; KPM-NX0001322).
Fig. 37 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)
Fig. 37. Lectotype (LE 01012432) and syntype (LE 01012430) of Eriocaulon alpestre Hook.f. & Thomson ex Körn. var. robustium Maxim. (KPM-NX0001310).
Fig. 36 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)
Fig. 36. Syntype of Polygonatum giganteum A. Dietr var. macranthum Maxim. (LE 01012153; KPMNX0001304).
Fig. 32 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)
Fig. 32. Syntypes of Lycoris sanguinea Maxim. (LE 01012637, LE 01012635, LE 01012636; KPMNX0001294).
Fig. 4 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)
Fig. 4. Syntype of Aspidium craspedosorum Maxim. var. japonicum Maxim. (LE 01009865; KPM-NX0001854).
Fig. 6 in Plant Type Materials from Kanagawa Prefecture (Japan) in the Herbarium of the Komarov Botanical Institute (LE; Russia): Lycophytes, Ferns, Gymnosperms, and Angiosperms (Monocots and some Dicots)
Fig. 6. Lectotype (LE 01011614) and syntype (LE 01011615) of Chamaecyparis breviramea Maxim. (KPMNX0001841).
Fig. 1 in Assessment of barrier materials to protect plants from Florida leatherleaf slug (Mollusca: Gastropoda: Veronicellidae)
Fig. 1. Diagram of barrier and soil moisture evaluation arena. Slugs were inoculated onto moist soil in region "a," and could access a leaf disc on moist soil in region "c" afer traversing region "b" that contained wet or dry soil that was either with or without physical 'barrier' material. The circles represent a small plastic Petri dish within a larger Petri dish; the walls of dishes preserved the integrity of the soil moisture treatments.
Validation of highly sensitive method based on UHPLC-ESI-MS/MS for the quantification of progestogens and androgens in plant material.
<p>We prepared a highly sensitive method for the quantification of progestogens and androgens in plant materials. This method is based on UHPLC-ESI-MS/MS. We show here the data used for the method validation. This includes the determination of linearity, recovery, precision, limits of detection and limits of quantification. </p> <p>The general procedure can be found in the txt or pdf file. </p> <p>The resulting data are collected in the excel file and can be found in the csv files, additonally.</p>
Figure S50 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S50. Optimisation of tropical and temperate niches across the Mimosoid phylogeny. Ancestral niches were estimated using a complete metachronogram for Caesalpinioideae, including non-Mimosoid Caesalpinioideae taxa, but only the Mimosoid clade is shown here.
Figure S48 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S48. Speciation rates estimated across the Caesalpinioideae metachronogram under eight scenarios with different fixed extinction rates. Extinction rates are shown above each subfigure, while speciation rates are indicated by branch colours.
Figure S49 in Supplementary Materials for Precipitation is the main axis of tropical plant phylogenetic turnover across space and time
Figure S49. Top: Speciation rates in the Mimosoid clade through time, estimated under different extinction rate scenarios using BAMM. Middle: Paleotemperature inferred from delta O18 measurements, using data from Zachos et al. (179). Bottom: Phenogram of mean annual precipitation in the Mimosoid clade through time. Coloured lines with dots show the median, wettest, and driest reconstructed rainfall niche of all nodes in the phylogeny per time bin of one million years.
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Allen Brain Atlas
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Annotated Behaviour and Observability Dataset (ABODe)
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.