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What factors influence the rediscovery of lost tetrapod species? Appendix E: Lost and rediscovered species
<p>For the study associated with this dataset, we created a database of lost and rediscovered tetrapod species and identified patterns in their distribution and factors influencing rediscovery. This appendix provides a list of the lost and rediscovered tetrapod species used in the analysis. It includes data on:</p> <ul> <li>taxonomy (class, order, family, species, common name, and whether the species is a subspecies);</li> <li>location (continent, country, region);</li> <li>each species threat status (as published on the IUCN Red List of Threatened Species: <a href="https://www.iucnredlist.org/">https://www.iucnredlist.org/</a>).</li> </ul> <p>The appendix also indicates:</p> <ul> <li>whether each species was included in another list of lost tetrapod species published by the organisation Re:wild (<a href="https://www.rewild.org/">https://www.rewild.org/</a>);</li> <li>whether each species was used to construct the phylogenetic trees used for analysis.</li> </ul>
Linked collectors and determiners for: " Nicoletia " tergata Mills, 1940 rediscovered in Florida and confirmed as the first species of the Coletiniinae (Zygentoma: Nicoletiidae) in North America.
Natural history specimen data linked to collectors and determiners held within, "" Nicoletia " tergata Mills, 1940 rediscovered in Florida and confirmed as the first species of the Coletiniinae (Zygentoma: Nicoletiidae) in North America". Claims or attributions were made on Bionomia by volunteer Scribes, <a href="https://bionomia.net/dataset/d1acc53a-8d27-4ebf-a8ad-0b135b05ef8d">https://bionomia.net/dataset/d1acc53a-8d27-4ebf-a8ad-0b135b05ef8d</a> using specimen data from the dataset aggregated by the Global Biodiversity Information Facility, <a href="https://gbif.org/dataset/d1acc53a-8d27-4ebf-a8ad-0b135b05ef8d">https://gbif.org/dataset/d1acc53a-8d27-4ebf-a8ad-0b135b05ef8d</a>. Formatted as a Frictionless Data package.
Fig. 5 in Rediscovering the old from new: two curious species of Coenosia Meigen (Diptera: Muscidae) from South Africa
Fig. 5. Coenosia macrotriseta sp. n., ♂, dorsal view: (A) thorax and (B) scutellum. Abbreviations: dc – dorsocentral seta, pprn – postpronotal seta, npl – notopleural seta, spal – supra-alar seta, pal – postalar seta. Scale bar = 0.2 mm.
Fig. 1 in Rediscovering the old from new: two curious species of Coenosia Meigen (Diptera: Muscidae) from South Africa
Fig. 1. Lateral habitus: (A) Coenosia macrotriseta sp. n., ♂; (B) C. globuliseta Pont, ♂. Scale bar = 1 mm.
Figs 2, 3 in Rediscovering the old from new: two curious species of Coenosia Meigen (Diptera: Muscidae) from South Africa
Figs 2, 3. (2) Head in lateral view: (A) C. macrotriseta sp. n., ♂; (B) C. globuliseta Pont, ♂. Scale bar = 0.5 mm; (3) palpi: (A) C. macrotriseta sp. n., ♂; (B) C. globuliseta Pont, ♂. Scale bar = 0.2 mm.
Figs 6–9 in Rediscovering the old from new: two curious species of Coenosia Meigen (Diptera: Muscidae) from South Africa
Figs 6–9. Coenosia macrotriseta sp. n., ♂ (A) and C. globuliseta Pont, ♂ (B): (6) sternite 5, dorsal view; (7) cercal plate, dorsal view; (8) epandrium, surstylus and cercal plate, lateral view; (9) phallic complex, lateral view. Scale bar = 0.2 mm.
What factors influence the rediscovery of lost tetrapod species? Appendix E: Lost and rediscovered species
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Figure 9 in Redescription of Pelecorhynchus kroeberi (Lindner), a Patagonian species rediscovered after more than 100 years in Chile (Diptera: Pelecorhynchidae)
Figure 9. Terminalia of P. kroeberi (Lindner) female. (A) Terminalia dorsal view. (B) Terminalia ventral view. Abbreviations: cerc: cercus; pvl: posteroventral lobe; spm dt: spermathecal duct; st 8: sternite 8; tg 9: tergite 9. Scale bar = 0.1 mm.
Figure 9 in Redescription of Pelecorhynchus kroeberi (Lindner), a Patagonian species rediscovered after more than 100 years in Chile (Diptera: Pelecorhynchidae)
Figure 9. Terminalia of P. kroeberi (Lindner) female. (A) Terminalia dorsal view. (B) Terminalia ventral view. Abbreviations: cerc: cercus; pvl: posteroventral lobe; spm dt: spermathecal duct; st 8: sternite 8; tg 9: tergite 9. Scale bar = 0.1 mm. Pseudoerinna Shiraki, Rhagio Fabricius, Symphoromyia to Pelecorhynchus, and stated that "(…) P. kroeberi is simi- Frauenfeld), and Vermileonidae (Vermileo Macquart) lar to P. elegans (Philippi), but differs in that P. kroeberi has (Stuckenberg, 2001; Kerr, 2010). The similarity of the white hairs on the pleura, scutellum with distal margin posteroventral lobes in Pelecorhynchus and could with brown hairs, and legs reddish brown (…)″. Clearly, be interpreted as a synapomorphy of Rhagionidae + there are more differences between P. kroeberi and P. el- Pelecorhynchus (Pelecorhychidae) (see Santos, 2006). The egans. Also, there are many characters by which P. kroeshape of sternite 8, with the acuminate anterior margin, beri can be distinguished from the other South American is an additional feature supporting Rhagionidae and species of Pelecorhynchus, all of them known only from Pelecorchynchidae as sister groups. Chile, as detailed in Table 1. Pechuman (1967: 555) commented on the morpho-
Figure 1 in Redescription of Pelecorhynchus kroeberi (Lindner), a Patagonian species rediscovered after more than 100 years in Chile (Diptera: Pelecorhynchidae)
Figure 1. (A) Distribution record for P. kroeberi of holotype (circle) and specimen (triangle) in southern Chile. (B) Map showing location of sampling site of P. kroeberi (Lindner) in Laguna San Rafael, Region de Aysén, Chile. (C) Malaise trap that captured P. kroeberi (Lindner).
Phylogenomics resolves the Himalayan endemic Brachymeniopsis gymnostoma (Bryophyta, Funariaceae), rediscovered after almost a century, as a species of Entosthodon
<p>Traits of the spore-bearing generation have historically provided the basis for systematic concepts across the phylogenetic spectrum and depth of mosses. Whether taxa characterized by a simple sporophytic architecture are closely related or emerged from independent reduction is often ambiguous. Phylogenomic inferences in the Funariaceae, which hold the model taxon <em>Physcomitrium</em> <em>patens</em>, revealed that several such shifts in sporophyte complexity occurred, mostly within the Entosthodon-Physcomitrium complex. Here, we report the rediscovery, nearly 100 years after its description, of the Chinese endemic and monospecific genus <em>Brachymeniopsis</em>, which is characterized by, among other traits, its short sporophytes lacking the sporangial peristome teeth controlling spore dispersal. Phylogenomic inferences reveal that its sole species, <em>B. gymnostoma</em> arose within the clade of <em>Entosthodon</em> sensu stricto, a genus with typically long-exerted capsules. We therefore propose to transfer <em>B. gymnostoma</em> to the genus <em>Entosthodon</em>, as <em>E. gymnostomus</em>. Furthermore, <em>Clavitheca poeltii</em>, the sole species of the genus, is morphologically highly similar to <em>E. gymnostomus</em>, and should also be transferred to <em>Entosthodon</em>, but is retained as a distinct taxon, <em>E. poeltii</em>, until additional populations allow for testing the robustness of the observed divergence in costa and seta length between the Nepalese and Chinese populations.</p>
Fig. 4 in Rediscovering the old from new: two curious species of Coenosia Meigen (Diptera: Muscidae) from South Africa
Fig. 4. First pair of orbital setae of Coenosia macrotriseta sp. n., ♂: (A) apex, (B) base.
Phylogenomics resolves the Himalayan endemic Brachymeniopsis gymnostoma (Bryophyta, Funariaceae), rediscovered after almost a century, as a species of Entosthodon
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Data from: Rediscovering a forgotten canid species
Background: The African wolf, for which we herein recognise Canis lupaster Hemprich and Ehrenberg, 1832 (Symbolae Physicae quae ex Itinere Africam Borealem er Asoam Occidentalem Decas Secunda. Berlin, 1833) as the valid species name (we consider the older name Canis anthus Cuvier, 1820 [Le Chacal de Sénégal, Femelle. In: Geoffroy St.-Hilaire E, Cuvier F, editors. Histoire Naturelle des Mammifères Paris, A. Belin, 1820] a nomen dubium), is a medium-sized canid with wolf-like characters. Because of phenotypic similarity, specimens of African wolf have long been assigned to golden jackal (Canis aureus Linnaeus, 1758 [Systema Naturae per Regna Tria Naturae, Secundum Classes, Ordines, Genera, Species, cum Characteribus, Differentiis, Synonymis, Locis. Tomus I. Editio decima, reformata, 1758]). Results: Here we provide, through rigorous morphological analysis, a species description for this taxonomically overlooked species. Through molecular sequencing we assess its distribution in Africa, which remains uncertain due to confusion regarding possible co-occurrence with the Eurasian golden jackal. Canis lupaster differs from all other Canis spp. including the golden jackal in its cranial morphology, while phylogenetically it shows close affinity to the Holarctic grey wolf (Canis lupus Linnaeus, 1758 [Systema Naturae per Regna Tria Naturae, Secundum Classes, Ordines, Genera, Species, cum Characteribus, Differentiis, Synonymis, Locis. Tomus I. Editio decima, reformata, 1758]). All sequences generated during this study clustered with African wolf specimens, consistent with previous data for the species. Conclusions: We suggest that the estimated current geographic range of golden jackal in Africa represents the African wolf range. Further research is needed in eastern Egypt, where a hybrid zone between Eurasian golden jackal and African wolf may exist. Our results highlight the need for improved studies of geographic range and population surveys for the taxon, which is classified as 'least concern' by the IUCN due to its erroneous identification as golden jackal. As a species exclusively distributed in Africa, investigations of the biology and threats to African wolf are needed.
FIGURES 14–16 in Redescription of three species of Anastrepha (Diptera, Tephritidae) rediscovered in Brazil, with the establishment of a new synonym
FIGURES 14–16. Anastrepha bivittata: 14, Macquart Collection (MHNLi) Box 2 Tephritidae; 15, lectotype in Box 2; 16, Macquart's label.
FIGURES 17–20 in Redescription of three species of Anastrepha (Diptera, Tephritidae) rediscovered in Brazil, with the establishment of a new synonym
FIGURES 17–20. Anastrepha bivittata lectotype female: 17, lateral habitus; 18, wing; 19, dorsal habitus; 20, abdomen, dorsal.
FIGURES 25–29 in Redescription of three species of Anastrepha (Diptera, Tephritidae) rediscovered in Brazil, with the establishment of a new synonym
FIGURES 25–29. Anastrepha tenella Zucchi: 25, wing; 26, aculeus, ventral; 27–28, aculeus tip, ventral; 29, eversible membrane (holotype) (Brazil: Linhares, ES).
FIGURES 21–24 in Redescription of three species of Anastrepha (Diptera, Tephritidae) rediscovered in Brazil, with the establishment of a new synonym
FIGURES 21–24. Anastrepha matertela Zucchi: 21, wing; 22, aculeus, ventral; 23, aculeus tip, ventral (holotype); 24, eversible membrane, denticles (Brazil: Linhares, ES).
FIGURES 2–9 in Redescription of three species of Anastrepha (Diptera, Tephritidae) rediscovered in Brazil, with the establishment of a new synonym
FIGURES 2–9. Anastrepha bivittata: 2, abdomen (lectotype); 3 (lectotype) and 8 (SEM), eversible membrane; 4 (lectotype) and 6, aculeus, ventral; 5 (lectotype) and 7, aculeus tip, ventral; 9. egg (Brazil: Linhares, ES).
FIGURES 10–13 in Redescription of three species of Anastrepha (Diptera, Tephritidae) rediscovered in Brazil, with the establishment of a new synonym
FIGURES 10–13. Anastrepha bivittata (male terminalia): 10–11, epandrium and surstyli, (posterior and lateral); 12, proctiger; 13, glans (Brazil: Linhares, ES).
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Allen Brain Atlas
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DANDI Archive for NWB datasets
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International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.