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Desert Fertilization Experiment: investigation of Sonoran desert ecosystem response to atmospheric deposition and experimental nutrient addition, ongoing since 2006
Launched in 2006 with support from the National Science Foundation (NSF) and leveraged by the CAP LTER, the Carbon and Nitrogen deposition (CNdep) project sought to answer the fundamental question of whether elemental cycles in urban ecosystems are qualitatively different from those in non-urban ecosystems. Ecosystem scientists, atmospheric chemists, and biogeochemists tested the hypothesis that distinct biogeochemical pathways result from elevated inorganic nitrogen and organic carbon deposition from the atmosphere to the land. To test the hypothesis, scientists examined the responsiveness of Sonoran desert ecosystems to nutrient enrichment by capitalizing on a gradient of atmospheric deposition in and around the greater Phoenix metropolitan area. Fifteen desert study sites were established, with five locations each west and east of the urban core, and in the urban core in desert preserves. In addition to the gradient of atmospheric deposition in and around the urban core, select study plots at each of the fifteen desert locations receive amendments of nitrogen, phosphorus, or nitrogen + phosphorus fertilizer. Measured variables include soil properties, perennial and annual plant growth, and atmospheric deposition of nitrogen. At the close of the initial grant period, the CAP LTER assumed responsibility for the project, renamed the Desert Fertilization Experiment, which provides a remarkable platform to study the long-term effects of nutrient enrichment on desert ecosystem properties.
Plant Responses to the GCE-LTER Seawater Addition Long Term Experiment (SALTEx) from 2013 to 2017
This study was conducted in a tidal freshwater marsh (31°20’16” N, 81°27’52” W) on the Altamaha River, GA. Each plot was defined by a 2.5 m x 2.5 m polycon frame, inserted 12 cm into the soil. The frames had drain holes in the sides above the soil surface that were plugged when plots were watered but open otherwise to allow tidal exchange. The plots were randomly assigned to five treatments. Plots were monitored without imposing any treatments in 2013. Treatments started on April 14, 2014. Plots receive diluted saltwater (press and pulse of saline water treatments, n=6), freshwater (freshwater addition treatment, n=6), or no water additions (control with frame and control treatments, n=6 and 7, respectively). The press plots received additions of a mixture of seawater and fresh river water four times each week. Pulse plots received the same mixture but only for 8 weeks in September and October. The freshwater treatment plots received additions of fresh river water four times each week. To document treatment effects on the plant community, we measured stem height, photosynthesis, and percent cover of plants, and blocking of light by the vegetation. We used the same 0.75 m x 0.75 m subplot inside each plot for plant measurements, and took the measurements 3 – 6 times during each growing season from 2013 to 2017. We measured height of all stems of Zizaniopsis miliacea and Persicaria hydropiperoides, and all leaves of Pontederia cordata. In each plot, we chose the tallest individual of those three species and measured their photosynthetic rates using LCi photosynthesis System (ADC BioScientific Ltd, Hoddesdon, UK). Around the same dates, we also visually estimated the percent cover of Ludwigia repens, Persicaria hydropiperoides, Pontederia cordata, and Zizaniopsis miliacea in the entire 2.5 m x 2.5 m plot. We summed the stem heights by species as a first approximation of species biomass. We measured the photosynthetically active radiation (PAR) above top and underneath
Plant community responses to functional group and species removals along biodiversity experiment vegetation transects at the Jornada Basin LTER site, 1997-2002
This dataset contains vegetative cover data of plots that have had various plant functional groups or species experimentally removed at the Jornada Basin LTER site in southern New Mexico, USA. This data was collected with the objective to distinguish the differential effects of plant community biomass, functional groups, and biodiversity within functional groups on ecosystem and plant community function. To make these distinctions, treatments were established by the selective removal of plant species or functional groups within experimental plots. There are eight treatments: control (C, no removals); four functional group removal treatments (PG, perennial grass removed; S, shrubs removed; SSh, subshrubs removed; Succ, succulents removed), and three species richness manipulation treatments. Richness manipulations included a simplified treatment (Simp), where only the single most abundant species of each growth form is preserved and all other species in the growth form are removed, a reduced‐Larrea treatment (rL), where the Larrea is assumed to be the dominant and is removed while minority components remain, and a reduced-Prosopsis treatment (rP), where Prosopis rather than Larrea is removed as the shrub dominant. Following treatments, vegetative data was collected by sampling each plot along three transects twice a year (Spring and Fall) for 5 years from 1997-2002 (no data collected in 1998). This data set consists of the date of collection, plot number, treatment type, transect number, quadrat number, species codes, two diameters, height, condition, count, record IDs, and error codes. This study is complete.
Species diversity and plant dominance influence grassland stability in response to extreme climatic events and anthropogenic drivers across three LTER sites: Cedar Creek, Konza Prairie, and Kellogg Biological Station, 1982-2023.
The data in this package is associated with the analysis for a manuscript titled "Multiple community properties drive ecosystem resistance and resilience to extreme climate events across mesic grasslands". The files include compiled data on plant biomass production, species abundance, experimental treatments, extreme climate event values, and calculated diversity and stability measures from grassland plots in experiments at CDR, KBS, and KNZ LTER sites.
Desert Fertilization Experiment: investigation of Sonoran desert ecosystem response to atmospheric deposition and experimental nutrient addition, ongoing since 2006 (Reformatted to the ecocomDP Design Pattern)
This data package is formatted as an ecocomDP (Ecological Community Data Pattern). For more information on ecocomDP see https://github.com/EDIorg/ecocomDP. This Level 1 data package was derived from the Level 0 data package found here: https://pasta.lternet.edu/package/metadata/eml/knb-lter-cap/632/9. The abstract below was extracted from the Level 0 data package and is included for context:
Projected Snow Cover Reductions and Mid-latitude Cyclone Responses in the North American Great Plains, 1986 - 2005
Extratropical cyclones are responsible for major weather events and trends in the mid-latitudes and preferentially develop in regions of enhanced cyclogenesis and proceed along climatological storm tracks. It has been shown that terrestrial snow cover exerts considerable influence on atmospheric baroclinicity which is largely responsible for the aforementioned cyclogeneses and storm tracks. Research about the effect which terrestrial snow cover exerts on cyclones' intensities, trajectories, and precipitation characteristics is limited but indicates a robust relationship with these factors. Many examinations of climate model projections have generally shown a poleward shift in storm tracks by the late 21st century though none have determined the degree to which the coincident poleward shift in snow extent is responsible. A method of imposing 10th, 50th, and 90th percentile values of snow retreat between the late 20th and 21st centuries as projected by 14 models of the Coupled Model Intercomparison Project Phase Five (CMIP5) is used to alter 20 historical cold season cyclones which tracked over or adjacent to the North American Great Plains. Simulations by the Advanced Research version of the Weather Research and Forecast Model (WRF-ARW) are initialized at 0 to 4 days prior to cyclogenesis. Including control and sensitivity testing wherein snow is unaltered or removed entirely, each cyclone case is simulated 25 times for a total of 500 simulations.
Experimental soil metabolism responses to oxygen availability and carbon pulses
Soil metabolism rates were measured in experimental flow-through reactors (FTRs) in order to assess responses to oxygen availability (i.e., redox conditions) and pulsed inputs of bioavailable carbon. The oxygen and carbon manipulations were meant to simulate patchy conditions in the rhizosphere of Spartina alterniflora marshes. The experiment was conducted over 97 days. During the first 84 days, pulses were applied weekly and metabolic responses were measured 1 and 5 days later. After the final carbon pulse, metabolism responses were followed for another 13 days in order to assess starvation responses. We used soils from Airport marsh on Sapelo Island.
Photosynthetic Light Response Curves in CRUI Land Use Project at Harvard Forest 1998
Ambient CO2 concentrations in terrestrial ecosystems vary substantially on several spatial and temporal scales as numerous soil, plant, and atmospheric processes respond to irradiance, temperature, moisture and wind. There is one widespread microhabitat in terrestrial ecosystems, the nearground zone, in which CO2 is naturally enhanced above average background levels. CO2 produced by soil respiration diffuses through the litter and boundary layers and dissipates fairly rapidly into the overlying bulk air. However, a marked vertical profile of nearground enriched CO2 (hereafter NEC) is usually present in the first 0-50 cm above ground. The degree of enrichment varies primarily with soil respiration rate and turbulent mixing, secondarily with photosynthesis by plants in the herbaceous stratum, and usually shows marked diel and seasonal variation. References to this CO2 "subsidy" and its effects on plants have occurred occasionally in the literature since 1939, but there have been few detailed studies of either the nearground profile or plant responses in the field, particularly for species that consistently occupy the nearground stratum. Considerable research over the last twenty years in both controlled and field environments has shown that co-occurring plant species may respond differently to artificially elevated CO2. But in contrast to light, temperature, water, and nutrients, plant community ecologists have generally not considered CO2 among the factors that regulate species’ distribution and abundance, except indirectly as it may affect water balance. We have documented differences in forest composition (woody and herbaceous), soil characteristics, microclimates, and nearground CO2 levels among six sites that were formerly plowed, pastured, or continuously forested woodlots in Prospect Hill. We selected three perennial herbaceous species (Aralia nudicaulis, wild sarsaparilla; Clintonia borealis, blue-bead lily; Medeola virginiana, Indian cucumber root) and two do
Vegetation Response in Simulated Hurricane Experiment at Harvard Forest since 1990
Wind disturbance profoundly shapes temperate forests but few studies have evaluated patterns and mechanisms of long-term forest dynamics following major windthrows. In 1990, we initiated a large hurricane simulation experiment in a 0.8 ha manipulation (pulldown) and 0.6 ha control area of a maturing Quercus rubra-Acer rubrum forest in New England. We toppled 276 trees in the pulldown, using a winch and cable, in the northwesterly direction of natural treefall from major hurricanes. Eighty percent of canopy trees and two-thirds of all trees greater than 5 cm dbh suffered direct and indirect damage. We used twenty years of measurements to evaluate the trajectory and mechanisms of forest response after intense disturbance. Based on the patch size and disturbance magnitude, we expected pioneer tree and understory species to drive succession. The first decade of analyses emphasized tree seedling establishment and sprouting by damaged trees as the dominant mechanisms of forest recovery in this extensive damaged area. However, despite 80% canopy damage and 8000 m2 patch size, surviving overstory and advance regeneration controlled longer-term forest development. Residual oaks make up 42% of stand basal area after 20 years. The new cohort of trees, dominated by black birch advance regeneration, contributes 30% of stand basal area. There were shifts in understory vegetation composition and cover, but few species were gained or lost after 20 years. Stand productivity rebounded quickly (litterfall recovered to pre-disturbance levels in six years), but we predict that basal area in the pulldown will lag behind the control (which gained 6 m2/ha over 20 years) for decades to come. This controlled experiment showed that although the scale and intensity of damage were great, abundant advance regeneration, understory vegetation, and damaged trees remained, allowing the forest to resist changes in ecosystem processes and invasion by new species.
Litter Decomposition in Response to Nitrogen Addition and Soil Warming at Harvard Forest 2010-2012
The purpose of this study is to examine whether two environmental change stressors (warming and nitrogen deposition) differentially impact litter decomposition. We investigated this using a two year litterbag decomposition experiment at the chronic N amendment experiment and the Barre Woods Soil warming experiment, and measured litter decay dynamics, enzyme activities and litter chemistry. In both years mass loss of the mixed litter was suppressed under N addition, with most of the mass loss observed in the first year compared to the second year (70% and 30% of total mass loss, respectively). Both years showed either increased activity for some hydrolytic enzymes (e.g. cellobiohydrolase) or no difference (e.g. ß-N-acetylglucosaminidase) with increased N. The lignolytic enzymes (e.g. peroxidases) showed no difference in activity in the first year, but had a highly reduced activity in year 2 under elevated N conditions. Soil warming did not significantly affect litter mass loss, and only had an effect on the activity of a few enzymes. In the oak reciprocal litterbag study, decay of oak litter originating from the highest N addition plot was negatively affected by simulated N deposition in the first year of decomposition, while after two years, simulated N deposition negatively affected all litter, and litter originating from the highest N addition plot decayed more slowly than control litter even without added N (i.e. in the control plot). In addition, in the first year of decomposition lignolytic enzyme activities were suppressed in litter originating from the N addition treatments, but due to simulated N deposition in year two.
Predator Contributions to Belowground Responses to Climate Warming at Harvard Forest 2014
Identifying the factors that control soil CO2 emissions will improve our ability to predict the magnitude of climate change-soil ecosystem feedbacks. Despite the integral role of invertebrates in belowground systems, they are excluded from climate change models. Soil invertebrates have consumptive and non-consumptive effects on microbes, whose respiration accounts for nearly half of soil CO2 emissions. By altering the behavior and abundance of invertebrates that interact with microbes, invertebrate predators may have indirect effects on soil respiration. We examined the effects of a generalist arthropod predator on belowground respiration under different warming scenarios. Based on research suggesting invertebrates may mediate soil CO2 emission responses to warming, we predicted that predator presence would result in increased emissions by negatively affecting these invertebrates. We altered the presence of wolf spiders (Pardosa spp.) in mesocosms containing a forest floor community. To simulate warming, we placed mesocosms of each treatment in ten open-top warming chambers ranging from 1.5 to 5.5° C above ambient at Harvard Forest, MA. As expected, CO2 emissions increased under warming and we found an interactive effect of predator presence and warming, though the effect was not consistent through time. The interaction between predator presence and warming was the inverse of our predictions: mesocosms with predators had lower respiration at higher levels of warming than those without predators. Carbon dioxide emissions were not significantly associated with microbial biomass. We did not find evidence of consumptive effects of predators on the invertebrate community, suggesting that predator presence mediates response of microbial respiration to warming through non-consumptive means. In our system we found a significant interaction between warming and predator presence that warrants further research into mechanism and generality of this pattern to other systems.
Salamander Response in Hemlock Removal Experiment at Harvard Forest 2003-2005
Despite reductions in prices, pre-emptive salvage logging of eastern hemlock stands has increased since the arrival of eastern hemlock woolly adelgid (Adelges tsugae, HWA) into this region. The microenvironmental changes associated with eastern hemlock loss have been found to be even more severe than when stands are lost to logging due to HWA infestation. This study assessed the effects of a commercial logging operation on two 90m x 90m (0.8 ha) plots, conducted in the winter of 2004-2005, on eastern redback salamander (Plethodon cinereus) relative abundance within the Simes tract at Harvard Forest. Over the past seven seasons (fall 2003 - fall 2005; excluding winter) I have been monitoring eastern redback salamander relative abundance using artificial cover objects (ACOs). The objectives of this study were 1) to assess whether logging has an impact on redback relative abundance at a plot level 2) to assess whether logging in isolated plots has an impact on relative abundance throughout the entire Simes tract 3) to assess whether redback relative abundance is stable over two years. Redback relative abundance in spring 2005 was 660% lower than in spring 2004 in logged plots, while in unlogged plots there was a 4% increase in redback relative abundance in spring 2005 versus spring 2004 (one-way ANOVA; df = 7, F = 6.21, p less than 0.05). Between fall 2004 and spring 2005 redback relative abundance decreased by 727% in the logged plots, compared to only a 29% decrease in unlogged plots (one-way ANOVA; df = 7, F = 10.51, p less than 0.05). Plots adjacent to logged plots had a significantly higher increase in redback relative abundance in spring 2005 versus spring 2004 than those not adjacent to the logged plots (one-way ANOVA; df = 5, F = 8.64, p less than 0.05). There was no significant difference in redback relative abundance in all plots in spring 2004 versus spring 2005 (one-way ANOVA; df = 15, F = 0.20, p = 0.665), or in fall 2004 versus spring 2005 (one-way ANOVA;
Oak Forest Response to Lymantria dispar Defoliation in Central Massachusetts since 2019
Invasive forest insects are a major global change driver, and the Northeastern U.S. is an invasion hotspot. Lymantria dispar is one of the region’s most destructive defoliators. After thirty years of quiescence, a surprisingly severe outbreak began in 2015 in southern New England, and by 2018 had caused dramatic oak mortality across thousands of forested acres. Lymantria dispar is considered a generalist, but in New England, oaks (Quercus sp.) are its preferred host trees. Oaks are key overstory trees in eastern North America. In New England, they have been a dominant component of the forest for thousands of years, and play a leading role in providing habitat, timber, and carbon sequestration. However, oak prominence is declining throughout New England. The reasons for oak’s decreasing abundance are the subject of lively debate but the role of L. dispar is likely underappreciated. Therefore, we need to understand the causes and consequences of oak dieback and mortality to this disturbance event, so that we can better predict responses to future outbreaks. To address this need, we established a set of permanent plots in central Massachusetts, chosen to capture a range of defoliation severity.
Juvenile Tree Responses to Soil Warming at Harvard Forest since 1995
The main goal of this study is to assess eastern tree species’ growth, survivorship, and phenological responses to soil warming in order to forecast future changes in forest succession and carbon dynamics. From 2003 through 2010, we determined that shade-tolerant, normally slower-growing species benefitted most from warming. We are continuing to study species-species responses to investigate the duration of and mechanisms behind species- and functional group responses to climate warming. Monitoring long-term demographic and physiological responses of juvenile trees with and without soil warming will allow us to model future eastern tree species successional shifts under warmer climate conditions.
Landscape Response to Hemlock Woolly Adelgid in Southern New England 1997-2011
The hemlock woolly adelgid (Adelges tsugae Annand; HWA), a small, aphid-like insect native to Japan, is currently migrating northward through eastern North America and threatens to eliminate eastern hemlock (Tsuga canadensis (L.) Carriere), one of the most abundant, long-lived shade tolerant species, across its range. In addition, a second invasive pest, the elongate hemlock scale (Fiorinia externa; EHS), often co-occurs with HWA on hemlock with unknown long-term consequences. The major objectives of this study were: (1) To characterize the pre-HWA distribution, composition, and structure of hemlock stands; (2) to characterize the spatial patterns of damage generated by HWA across southern New England since the time of its arrival in 1985; (3) to examine environmental and stand factors that are associated with declines in crown vigor and mortality of hemlock; (4) examine the dynamics of HWA and EHS in hemlock stands over time; and (5) assess whether there is a difference in the response of these insects to abiotic conditions (winter temperature, summer temperature, summer precipitation), and whether the distribution and abundance of each insect species is dependent on biotic interactions with the co-occurring insect species. Connecticut Stands (originally sampled in 1997 and 1998) Aerial photographs, photographic overlays, and extensive field study were used to map and develop GIS overlays of almost 6000 hemlock stands in a 4900 km2 study region extending from Long Island Sound northward to the Massachusetts border and including the Connecticut River Valley in Connecticut, USA. Intensive sampling of a random selection of 114 hemlock stands across the study area was used to document patterns of hemlock infestation, vigor, and mortality in relation to stand and site characteristics. Mantel tests were utilized to assess the relative importance of environmental and stand variables in controlling the intensity of HWA infestation and damage. Most stands were located along
Ecosystem and Vegetation Response to Hemlock Logging in Southern New England 1999-2005
This study compares the magnitude and trajectory of vegetation and ecosystem function dynamics associated with the direct impact of hemlock woolly adelgid (Adelges tsugae; HWA) infestation versus the indirect consequences of HWA-induced damage in the form of salvage and pre-emptive logging of hemlock (Tsuga canadensis (L.) Carriere) forests. The study was conducted within an area extending from southern Connecticut up to and including the Connecticut River lowlands west to the Berkshire Plateauin central Massachusetts, USA. Overstory and understory vegetation and ecosystem function parameters such as decomposition and nitrogen cycling were examined in logged and unlogged portions of 10 hemlock stands varying in HWA damage intensity. Intensive hemlock logging generated more rapid and pronounced microenvironment and vegetation changes than chronic HWA damage. Black birch (Betula lenta L.) seedling densities and percent cover of brambles (Rubus L. spp.), sedges (Carex L. spp.) and hay-scented fern (Dennstaedtia punctilobula Michx.) were significantly higher in recent harvests versus HWA-damaged and undamaged sites. High black birch sapling densities (greater than 7000 ha –1) were common in the older harvests but not in adjacent, HWA-damaged portions of these sites. Undamaged sites had 20% more forest floor mass than HWA-damaged sites and double the mass of older cuts. Mass loss rates of cellulose paper suggest that conditions were more favorable for decomposition in the damaged and older logged sites. Recently cut sites had significantly larger inorganic N pools than undamaged forests, although total net nitrogen (N) mineralization rates were not significantly different among treatments. Nitrification rates of 0.2 kg ha-1 day-1 measured in the oldest cuts were three times greater than in HWA-damaged sites and over 200 times greater than in undamaged hemlock sites. However, resin bag capture in the older cuts was similar to amounts captured in undamaged and damaged fore
Ecosystem Response to Hemlock Woolly Adelgid in Southern New England 1998-2019
In 1998 we began examining the response of ecosystem processes to the stress and mortality caused by the introduced hemlock woolly adelgid (HWA) in southern New England. Healthy hemlock forests typically have slow decomposition and N cycling rates due to their low foliar N content and cool microclimate. However, thinning canopies associated with HWA infestations are starting to reverse this trend, due to dramatic increases in light levels and soil temperature. Within 8 study sites varying in HWA infestion level, we continue to investigate the magnitude and duration of N dynamics associated with HWA infestations by measuring nitrogen (N) mineralization rates using close-topped soil cores during the last five years. In addition, ion-exchange resin bags are used to estimate the spatial availability of N within sites and the extent to which NO3 is being lost. Measurements of gravimetric moisture content and soil temperature were used with hemispherical photographs to assess microenvironmental changes. During the first five years of this study, thinning canopies from heavy HWA damage resulted in increased light, soil temperature, and mineral soil moisture, and decreased forest floor moisture content. Heavily infested sites continue to have larger extractable NH4 and NO3 – N pools, and significantly higher net nitrification rates than healthy hemlock forests. In addition, resin bags captured more ammonium and nitrate in infested versus uninfested stands. Results indicate that introduced pests and selective tree decline can rapidly and dramatically alter ecosystem processes, even prior to the onset of extensive tree mortality. In 2001, we began examining 2 additional stands that contain high overstory hemlock mortality and a dense black birch understory. We will continue to sample these stands as they deteriorate to determine the extent to which changes in overstory composition, microenvironment, and soil conditions produce fundamental changes in the cycling of nitrogen. S
Avian Response to Hemlock Woolly Adelgid in Southern New England 2000-2001
This study examines changes in avian community composition associated with the decline and loss of eastern hemlock (Tsuga canadensis (L.) Carr.) resulting from chronic hemlock woolly adelgid (Adelges tsugae Annand; HWA) infestations. Overstory hemlock mortality was highly correlated with avian community composition. Abundance of eastern wood-pewee (Contopus virens), brown-headed cowbird (Molothrus ater), tufted titmouse (Baeolophus bicolor), white-breasted nuthatch (Sitta carolinensis), red-eyed vireo (Vireo olivaceus),hooded warbler (Wilsonia citrina), and several woodpecker species was highest at points with greater than 60% mortality. Black-throated green warbler (Dendroica virens), Acadian flycatcher (Empidonax virescens), blackburnian warbler (Dendroica fusca), and hermit thrush (Catharus guttatus) were strongly associated with intact hemlock stands that exhibit little or no mortality from HWA. Eastern hemlock has unique structural characteristics that provide important habitat for numerous bird species in the northeastern U.S. As a result, removal of hemlock by HWA has profound effects on avian communities. Black-throated green warbler, blackburnian warbler, and Acadian flycatcher are very strongly associated with hemlock forests in southern New England and appear to be the species that are particularly sensitive to hemlock removal. The hooded warbler, a species whose status is of regional concern, may actually benefit from the development of a dense seedling layer associated with high hemlock mortality.
Stream Periphyton Response to Hemlock Mortality in Central Massachusetts 2006
The Hemlock Wooly Adelgid (HWA) invasion is expected to cause widespread mortality of eastern hemlock [Tsuga canadensis (L.) Carriere] throughout much of New England. Light levels in streams with hemlock riparian zones are anticipated to increase as hemlock are replaced by deciduous trees. We sought to: 1) quantify differences in light reaching streams with hemlock and deciduous riparian zones, 2) determine if increases in light result in higher periphyton biomass, and 3) explore the role of macroinvertebrate grazing on periphyton biomass as light increases in an attempt to help predict stream ecosystem responses to hemlock mortality. Light measurements were taken along 100-800m stream reaches with riparian zones of healthy hemlock and deciduous trees in MA and CT in order to document an integrated light profile for each stream. In addition, a 2 x 2 factorial experimental design with five replicates was executed on a deciduous reach of Egypt Brook in central MA, in which light (high light vs. low light) and grazing (high grazing vs. low grazing) were manipulated. Light measurements were significantly higher for streams with deciduous riparian zones than hemlock riparian zones. Controlled shading reduced chlorophyll a, while excluding grazing yielded inconclusive results. Periphyton biomass in Egypt Brook was found to be light limited, and grazing did not suppress periphyton biomass. As hemlocks die, in-stream light will be significantly augmented, and periphyton biomass will increase. A challenge for stream ecologists will be to incorporate multiple physical, chemical, and biological controls on biota in order to fully understand how regional hemlock mortality will alter stream periphyton biomass.
Plant species-level responses to functional group and species removals in biodiversity experiment plots at the Jornada Basin LTER site, 1999
This dataset contains individual species size data in vegetation plots that have had various plant functional groups or species experimentally removed at the Jornada Basin LTER site in southern New Mexico, USA. This data was collected with the objective to distinguish the differential effects of plant community biomass, functional groups, and biodiversity within functional groups on ecosystem and plant community function. To make these distinctions, treatments were established by the selective removal of plant species or functional groups within experimental plots. There are eight treatments: control (C, no removals); four functional group removal treatments (PG, perennial grass removed; S, shrubs removed; SSh, subshrubs removed; Succ, succulents removed), and three species richness manipulation treatments. Richness manipulations included a simplified treatment (Simp), where only the single most abundant species of each growth form is preserved and all other species in the growth form are removed, a reduced‐Larrea treatment (rL), where the Larrea is assumed to be the dominant and is removed while minority components remain, and a reduced-Prosopsis treatment (rP), where Prosopis rather than Larrea is removed as the shrub dominant. In 1999, this pilot study attempted to assess individual species responses of representative individuals in these treatments. Ten randomly selected individuals of eight plant species were measured in each experimental plot, and this dataset reports volumetric data (diameters and height) for each. The study was designed as an individual-based complement to the transect data in EDI dataset knb-lter-jrn.210121001 but was not continued past 1999. This dataset is complete.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.