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8 results for “riverscape complexity”
F I G U R E 3 in Riverscape genetics of the orangethroat darter complex
F I G U R E 3 Orangethroat darter clade collection sites with colored circles corresponding to the proportion of individuals at the site that had predominant assignment to each genetic cluster identified in the STRUCTURE analysis for K=3. Inset shows region boundary between Upper Mississippi River and Ohio River regions.
F I G U R E 7 in Riverscape genetics of the orangethroat darter complex
F I G U R E 7 Principle component analysis (PCA) of Ceasia showing distribution of samples taken from glaciated, unglaciated, or the one basin that had both glaciated and unglaciated sampling sites ("Mix").
F I G U R E 8 in Riverscape genetics of the orangethroat darter complex
F I G U R E 8 FST isolation by distance plots. Segregation of allele frequencies is shown between pairs of basins v. geographic (river/land) distance. (a, b). All basin pairs in this study with comparisons within regions shown in black and between regions in gray for overland distance (a) and river distance (b). (c, d). Within region site comparisons, grouped by regions for overland distance (c) and river distance (d). The Tennessee River and Great Lakes regions were omitted because one basin was sampled in each region.
F I G U R E 1 in Riverscape genetics of the orangethroat darter complex
F I G U R E 1 Approximate collection sites of orangethroat species complex specimens used in this study. Colors indicate species. Numbers and region names correspond to USGS HUC2 watershed designations. Inset shows regional boundary between Upper Mississippi River and Ohio River regions.
F I G U R E 2 in Riverscape genetics of the orangethroat darter complex
F I G U R E 2 Results from STRUCTURE for (a) K = 3 and (b) K = 8. Each color corresponds to a distinct genetic cluster, and each bar represents an individual's assigned ancestry to each cluster. Names above chart correspond to river basin (HUC6). EB—E. burri, EP—E. pulchellum, ES— E. spectabile, and EU—E. uniporum. Glaciated and unglaciated correspond to areas that were/were not covered in ice during the last glacial maximum.
F I G U R E 4 Assigned ancestry plot using AIC criteria determining optimal K in Riverscape genetics of the orangethroat darter complex
F I G U R E 4 Assigned ancestry plot using AIC criteria determining optimal K of 5. Each color corresponds to a distinct genetic cluster, and each bar represents an individual's assigned ancestry to each cluster. Names above chart correspond to river basin (HUC6). EB—E. burri, EP— E. pulchellum, ES—E. spectabile, and EU—E. uniporum. Glaciated and unglaciated correspond to areas that were/were not covered in ice during the last glacial maximum.
F I G U R E 6 in Riverscape genetics of the orangethroat darter complex
F I G U R E 6 Principle component analysis (PCA) of Ceasia. Name indicates the basin where samples were collected.
F I G U R E 5 in Riverscape genetics of the orangethroat darter complex
F I G U R E 5 Cluster assignments at sampling locations under the AIC method and a K=5. Pie graphs represent proportion of individuals at the site assigned to a given cluster. Individuals with less than 85% assigned ancestry in either cluster are shown in gray.
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Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
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DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.