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Dataset results
17 results for “spatial fidelity”
Data for: Crall et al., Spatial fidelity of workers predicts collective response to disturbance in a social insect
<p>Dataset for: Crall et al., Spatial fidelity of workers predicts collective response to disturbance in a social insect, in final revision for Nature Communications.</p> <p>Includes two files - one behavioral data from uniquely identified worker bumblebees, and the second containing metadata for the colonies from which these data were generated (including experimental treatments, locations, sizes, etc.).</p>
Data from: Ecophenotypy, temporal and spatial fidelity, functional morphology, and physiological trade-offs among intertidal bivalves
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data and code for "Nest entrances, spatial fidelity, and foraging patterns in the red ant Myrmica rubra: a field and theoretical study"
<p>Data set and codes used for the results, figures and simulation of the paper "Nest entrances, spatial fidelity, and foraging patterns in the red ant <em>Myrmica rubra</em>: a field and theoretical study".</p>
FIG. 4 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge
FIG. 4. Analysis of global structure along the river corridor from the first principal component of the sPCA represented by (A) interpolation of lagged principal scores showing genetic clines and (B) colors indicating individual scores. Coordinates have been deliberately omitted to deter poachers.
FIG. 3 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge
FIG. 3. Bubble plot showing the results of two-dimensional local spatial autocorrelation analysis for all Eastern Box Turtles (n ¼ 165) sampled in northwestern Michigan. Circles represent individuals and the size of the circle is proportional to the P-values from permutation testing, with large circles representing individuals that are significantly more related to their five nearest neighbors than expected (P, 0.05) based on a random distribution of genotypes. Figure shows the distribution of five genetic ''hotspots'' in relation to known nesting sites (NS) across the study area. Some distantly sampled individuals are omitted for figure clarity.
FIG. 2 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge
FIG. 2. Spatial genetic autocorrelograms of genetic correlation coefficients (r) as a function of distance for Eastern Box Turtles in northwestern Michigan. Plots represent (A) all individuals (n ¼ 165), (B) females only (n ¼ 104), and (C) males only (n ¼ 51). Dashed lines are permuted 95% confidence intervals across all data, and error bars are bootstrapped 95% confidence intervals within each distance class. Tables below graphs represent data for each distance class including the number of pairwise comparisons (n), the correlation coefficients (r), and the P-values (p) associated with bootstrap tests of significance for positive spatial genetic autocorrelation.
FIG. 1 in Nest-Site Fidelity and Sex-Biased Dispersal Affect Spatial Genetic Structure of Eastern Box Turtles (Terrapene carolina carolina) at Their Northern Range Edge
FIG. 1. Scatterplot showing the matrix of pairwise genetic distances and matrix of pairwise geographic distances for box turtles sampled along the river corridor. Warmer colors within the kernel density indicate higher densities of points. The line (slope ¼ 1.074727e–05; R2 ¼ 0.002992) shows the correlation trend.
Data from: Measuring site fidelity and spatial segregation within animal societies
1.Animals often display a marked tendency to return to previously-visited locations that contain important resources, such as water, food, or developing brood that must be provisioned. A considerable body of work has demonstrated that this tendency is strongly expressed in ants, which exhibit fidelity to particular sites both inside and outside the nest. However, thus far many studies of this phenomena have taken the approach of reducing an animal's trajectory to a summary statistic, such as the area it covers. 2.Using both simulations of biased random walks, and empirical trajectories from individual rock ants, Temnothorax albipennis, we demonstrate that this reductive approach suffers from an unacceptably high rate of false negatives. 3.To overcome this, we describe a site-centric approach which, in combination with a spatially-explicit null model, allows the identification of the important sites towards which individuals exhibit statistically significant biases. 4.Using the ant trajectories we illustrate how the site-centric approach can be combined with social network analysis tools to detect groups of individuals whose members display similar space-use patterns. 5.We also address the mechanistic origin of individual site fidelity; by examining the sequence of visits to each site, we detect a statistical signature associated with a self-attracting walk - a non-Markovian movement model that has been suggested as a possible mechanism for generating individual site fidelity.
Data from: Measuring site fidelity and spatial segregation within animal societies
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Data from: Tracking individuals shows spatial fidelity is a key regulator of ant social organization
Ants live in organized societies with a marked division of labor among workers, but little is known about how this is generated. We use a tracking system to continuously monitor individually-tagged workers in six colonies of the ant Camponotus fellah over 41 days. Network analyses of over 9 million interactions revealed three distinct groups that differ in behavioral repertoires. Each group represents a functional behavioral unit with workers moving from one group to the next as they age. The rate of interactions was much higher within- than between groups. The precise information on spatial and temporal distribution of all individuals permitted calculation of the expected rates of within- and between-group interactions. These values suggest that the network of interaction within colonies is primarily mediated by age-induced changes in the spatial location of workers.
Data from: Tracking individuals shows spatial fidelity is a key regulator of ant social organization
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Spatially-patterned and functional kidney assembloids recapitulate progenitor self-assembly and enable high-fidelity in vivo disease modeling
GEO Series GSE272707. Homo sapiens. 4 samples. Type: Other.
Spatially-patterned and functional kidney assembloids recapitulate progenitor self-assembly and enable high-fidelity in vivo disease modeling
GEO Series GSE262382. Mus musculus. 8 samples. Type: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing.
Spatially-patterned and functional kidney assembloids recapitulate progenitor self-assembly and enable high-fidelity in vivo disease modeling [hKPA_invivo_data]
GEO Series GSE297772. Homo sapiens. 5 samples. Type: Expression profiling by high throughput sequencing.
Spatially-patterned and functional kidney assembloids recapitulate progenitor self-assembly and enable high-fidelity in vivo disease modeling [hKPA_TT_data]
GEO Series GSE297771. Homo sapiens. 4 samples. Type: Expression profiling by high throughput sequencing.
Data accompanying Hendrix et al. 2024, "Faithful pals and familiar locales: differentiating social and spatial site fidelity during reproduction"
<p>Data accompanying our manuscript published in Philosophical Transactions of the Royal Society B. Code for analyses are also available at https://github.com/jghendrix/calving-social-fidelity/</p>
Spatially-patterned and functional kidney assembloids recapitulate progenitor self-assembly and enable high-fidelity in vivo disease modeling
GEO Series GSE264516. Mus musculus. 34 samples. Type: Expression profiling by high throughput sequencing.
ScienceDex guides
Understand access before you commit
These curated guides explain access requirements, typical timelines, costs, and reuse considerations for widely used research datasets.
Allen Brain Atlas
Allen Brain Atlas is an Allen Institute collection of brain map atlases, datasets, APIs, and analysis tools covering mouse, human, and non-human primate brain resources.
Annotated Behaviour and Observability Dataset (ABODe)
ABODe is a University of Edinburgh DataShare dataset for behavior classification in group-housed mice using home-cage video, identities, bounding boxes, ground-plate positions, and annotator labels.
DANDI Archive for NWB datasets
DANDI is a BRAIN Initiative archive for publishing and sharing neurophysiology data, including electrophysiology, optophysiology, and behavioral data packaged as NWB and related standards.
International Brain Laboratory public data
The International Brain Laboratory public data releases expose standardized mouse decision-making experiments, including Neuropixels recordings, widefield calcium imaging, behavior, and session metadata accessed through the ONE API.
OpenNeuro
OpenNeuro is a free, open platform for sharing neuroimaging datasets, with public search, dataset pages, and download paths for web, S3, DataLad, and the OpenNeuro CLI.