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Depolymerization of plant cell wall glycans by symbiotic human gut bacteria

GEO Series GSE25576. Parabacteroides distasonis; Dorea longicatena DSM 13814; [Clostridium] scindens ATCC 35704; Faecalibacterium prausnitzii M21/2; Collinsella aerofaciens ATCC 25986; Methanobrevibacter smithii; Agathobacter rectalis; Bacteroides sp. WH2; Bacteroides thetaiotaomicron; Bacteroides ovatus; Lachnospira eligens; Bacteroides thetaiotaomicron VPI-5482; Bacteroides ovatus ATCC 8483; Bacteroides caccae ATCC 43185; Thomasclavelia spiroformis DSM 1552; Phocaeicola vulgatus ATCC 8482; Agathobacter rectalis ATCC 33656; Phocaeicola vulgatus; Blautia obeum ATCC 29174; [Ruminococcus] torques ATCC 27756; Bacteroides uniformis ATCC 8492; Parabacteroides distasonis ATCC 8503. 39 samples. Type: Expression profiling by array.

ShareScore

12/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship: 4
Harmonization: 4
Access: 0
Reuse readiness: 0
Engagement: 4

Topics

Parabacteroides distasonis; Dorea longicatena DSM 13814; [Clostridium] scindens ATCC 35704; Faecalibacterium prausnitzii M21/2; Collinsella aerofaciens ATCC 25986; Methanobrevibacter smithii; Agathobacter rectalis; Bacteroides sp. WH2; Bacteroides thetaiotaomicron; Bacteroides ovatus; Lachnospira eligens; Bacteroides thetaiotaomicron VPI-5482; Bacteroides ovatus ATCC 8483; Bacteroides caccae ATCC 43185; Thomasclavelia spiroformis DSM 1552; Phocaeicola vulgatus ATCC 8482; Agathobacter rectalis ATCC 33656; Phocaeicola vulgatus; Blautia obeum ATCC 29174; [Ruminococcus] torques ATCC 27756; Bacteroides uniformis ATCC 8492; Parabacteroides distasonis ATCC 8503 Expression profiling by array GEO gene expression