Table S2.- ADC phylogeny data set.
<p>Data set for phylogenetic analysis, we used the Pfam v31.0 database to determine which proteinortho clusters represent the ADC proteins. A total of 37 homologs belonging to alphaproteobacteria sequences were tested with a group of nine external sequences were aligned against Muscle v3.8.31. The resulting dataset containing 46 putative ADC homologs was used to infer the evolutionary relationships. We used ProtTest3 v3.4.2 for the evolutionary model and, the best result was LG+G model; using amino acid alignment. The phylogenetic analysis was performed with PhyML v3.3.20170530 under (-d aa -m LG -a e -o ltr) parameters. </p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0