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Table S2.- ADC phylogeny data set.

<p>Data&nbsp;set for phylogenetic analysis, we used the Pfam v31.0 database to determine which proteinortho clusters represent the ADC proteins. A total of 37 homologs belonging to alphaproteobacteria sequences were tested with a group of nine external sequences&nbsp;were aligned against Muscle v3.8.31.&nbsp;The resulting dataset containing 46 putative ADC homologs was used to infer the evolutionary relationships. We used ProtTest3 v3.4.2 for the evolutionary model and, the best result was LG+G model; using amino acid alignment. The phylogenetic analysis was performed with PhyML v3.3.20170530 under (-d aa -m LG -a e -o ltr) parameters.&nbsp;</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0

Topics

Dataset details

Repository
zenodo
Published
December 25, 2019
License
cc-by-4.0
DOI
10.5281/zenodo.3593473

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