Platynereis EM training data
<p>Training data for Convolutional Neural Networks used in the publication Whole-body integration of gene expression and single-cell morphology. We provide training data for segmenting structures in the SerialBlockface Electron Microscopy data-set containing a complete 6 day old Platynereis dumerilii larva, in particular for:<br> - cell membranes: 9 training blocks @ resolution 20x20x25 nm. Based on initial training data provided by https://ariadne.ai/.<br> - cilia: 3 training and 2 validation blocks @ resolution 20x20x25 nm.<br> - cuticle: 5 training blocks @ resolution 40x40x50 nm.<br> - nuclei: 12 training blocks @ resolution 80x80x100 nm. Based on initial training data provided by https://ariadne.ai/.<br> <br> For details on how to use this data for training, see https://github.com/platybrowser/platybrowser-backend/tree/master/segmentation.</p>
ShareScore
28/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 0
- Engagement
- 0
Topics
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