ZeroCostDL4Mic - Stardist example training and test dataset

<p><strong>Name</strong>: ZeroCostDL4Mic - Stardist example training and test dataset</p> <p>(see <a href="http://https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki">our Wiki</a> for details)</p> <p>&nbsp;</p> <p><strong>Data type</strong>: Paired microscopy images (fluorescence) and corresponding masks</p> <p><strong>Microscopy data type</strong>: Fluorescence microscopy (SiR-DNA) and masks obtained via manual segmentation (see <a href="https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist">https://github.com/HenriquesLab/ZeroCostDL4Mic/wiki/Stardist</a> for details about the segmentation)</p> <p><strong>Microscope</strong>: Spinning disk confocal microscope with a 20x 0.8 NA objective</p> <p><strong>Cell type</strong>: DCIS.COM LifeAct-RFP cells</p> <p><strong>File format</strong>: .tif (16-bit for fluorescence and 8 and 16-bit for the masks)</p> <p><strong>Image size</strong>: 1024x1024 (Pixel size: 634 nm)</p> <p>&nbsp;</p> <p><strong>Author(s)</strong>: Johanna Jukkala^1,2 and Guillaume Jacquemet^1,2</p> <p><strong>Contact email</strong>: guillaume.jacquemet@abo.fi</p> <p><strong>Affiliation</strong> :&nbsp;</p> <p>1) Faculty of Science and Engineering, Cell Biology, &Aring;bo Akademi University, 20520 Turku, Finland</p> <p>2) Turku Bioscience Centre, University of Turku and &Aring;bo Akademi University, FI-20520 Turku, Finland</p> <p>&nbsp;</p> <p><strong>Associated publications</strong>: Unpublished</p> <p><strong>Funding bodies</strong>: G.J. was supported by grants awarded by the Academy of Finland, the Sigrid Juselius Foundation and &Aring;bo Akademi University Research Foundation (CoE CellMech) and by Drug Discovery and Diagnostics strategic funding to &Aring;bo Akademi University.</p>