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ECMDB2.0 MetFrag Local CSV

<p>This is a local CSV file of ECMDB 2.0 (<a href="http://ecmdb.ca/">http://ecmdb.ca/</a>) for MetFrag (<a href="https://msbi.ipb-halle.de/MetFrag/">https://msbi.ipb-halle.de/MetFrag/</a>).</p> <p>Data was extracted to CSV from the SDF, with column headers for compulsory fields adjusted to fit the MetFrag format.</p> <p>This file is for users wanting to integrate the latest ECMDB into MetFrag CL workflows (offline), this file will be integrated into MetFrag online; please use the file in the dropdown menu rather than uploading this one.</p> <p>The ECMDB is an expertly curated database containing extensive metabolomic data and metabolic pathway diagrams about <em>Escherichia coli</em> (strain K12, MG1655). This database includes significant quantities of &ldquo;original&rdquo; data compiled by members of the Wishart laboratory as well as additional material derived from hundreds of textbooks, scientific journals, metabolic reconstructions and other electronic databases.</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
0
Engagement
8

Topics