Artifacts for q2-micom

<p>This repository hosts artifacts for use with q2-micom and MICOM. In particular it provides summarized metabolic model databases and growth media.</p> <p>&nbsp;</p> <p><strong>Model databases</strong></p> <p>Model databases are provided for family, genus and species ranks. AGORA is a manually curated database of 818 high quality metabolic reconstructions. Raw data was obtained from https://www.vmh.life/.</p> <p>CarveME is an automatically reconstructed database but offers much more organisms (&gt;5K strains). Raw data was obtained from https://github.com/cdanielmachado/embl_gems.</p> <p>&nbsp;</p> <p><strong>Diets</strong></p> <p>We currently only provide an average western diet which is only compatible with AGORA.</p> <p>&nbsp;</p> <p>&nbsp;</p>