Barnase-Barstar Binding Pathways
<p>This is a collection of binding trajectories from the atomistic simulation of the Barnase-Barstar system presented in <a href="https://doi.org/10.1039/C8SC04811H">Protein–protein binding pathways and calculations of rate constants using fully-continuous, explicit-solvent simulations</a> by Saglam and Chong. There is one representative trajectory from each of the five pathways identified.</p> <p>The GRO file here is to be used as a "topology" file, so if your chosen MD viewer or analysis software includes the reference frame from the GRO file, be sure to delete the frame before running your analysis, etc. If you want to analyze just the first frame of a trajectory, load in the GRO/topology file, delete the frame from that file, load in the relevant XTC file and use the first frame from that.</p> <p>Please cite the Saglam and Chong paper if you use these data.</p>
ShareScore
24/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 0
- Engagement
- 0
Dataset details
- Repository
- zenodo
- Published
- July 1, 2020
- License
- cc-by-4.0
- DOI
- 10.5281/zenodo.3885770
Scored with release 0.9.0
ScienceDex for faculty
Your academic CV and NIH biosketch
Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.