Skip to main content
zenodoopen

Barnase-Barstar Binding Pathways

<p>This is a collection of binding trajectories from the atomistic simulation of the Barnase-Barstar system presented&nbsp;in&nbsp;<a href="https://doi.org/10.1039/C8SC04811H">Protein&ndash;protein binding pathways and calculations of rate constants using fully-continuous, explicit-solvent simulations</a>&nbsp;by Saglam and Chong. There is one representative trajectory from each of the five pathways identified.</p> <p>The GRO file here is to be used as&nbsp;a &quot;topology&quot; file, so if your chosen MD viewer or analysis software includes the reference frame from the GRO&nbsp;file, be sure to delete the frame before running your analysis, etc. If you want to analyze just the first frame of a trajectory, load in the GRO/topology file, delete the frame from that file, load in the relevant XTC file and use the first frame from that.</p> <p>Please cite the Saglam and Chong paper if you use these data.</p>

ShareScore

24/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
0
Engagement
0

Dataset details

Repository
zenodo
Published
July 1, 2020
License
cc-by-4.0
DOI
10.5281/zenodo.3885770

Scored with release 0.9.0

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.