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Dataset for CHISEL complete demo on chromosome 6

<p>This dataset contains all the files required for the complete demo of CHISEL on chromosome 6. Specifically, the files included here are:</p> <ol> <li>`cells.bam` barcoded BAM file (using flag `CB:Z:[A,C,G,T]+`) for 100 tumor single cells;</li> <li>`cells.bam.bai` index of the barcoded BAM file;</li> <li>`normal.bam` matched-normal BAM file for the 100 tumor single cells;</li> <li>`normal.bam.bai` index of the matched-normal BAM file.</li> <li>&#39;phases.tsv&#39; tab-separated dataframe with phases of germline SNPs, with fields `CHROMOSOME&nbsp; POS&nbsp; PHASE`</li> </ol>

ShareScore

32/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
0
Engagement
8

Dataset details

Repository
zenodo
Published
July 16, 2020
License
cc-by-4.0
DOI
10.5281/zenodo.3950298

Scored with release 0.9.0

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