zenodoopen
spVCF for the resequenced 1000 Genomes Project (chr21)
<p>chr21 <a href="https://github.com/mlin/spVCF">spvcf.gz</a> file derived from <a href="https://www.internationalgenome.org/data-portal/data-collection/30x-grch38">New York Genome Center's GATK joint variant call set</a> of <a href="https://www.nature.com/articles/nature15393">1000 Genomes Project</a> whole-genome resequencing (N=2,504), roughly 1/5 of the original vcf.gz file size.</p> <p> </p> <p> </p>
ShareScore
28/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 8
- Access
- 16
- Reuse readiness
- 0
- Engagement
- 0