U2- and U12-type intron classifications for Physarum polycephalum in BED format
<p>A BED file containing intron information for <em>Physarum polycephalum</em> introns classified as U2- or U12-type by <a href="https://github.com/glarue/intronIC">intronIC</a>. This data is associated with the following manuscript: https://doi.org/10.1101/2020.10.12.336362; the genome and annotation file used to identify the introns are available here: https://doi.org/10.5281/zenodo.4086119.</p> <p> </p> <p>The file columns are:</p> <p>1. Genome FASTA record name (scaffold)</p> <p>2. Intron start coordinate (0-indexed)</p> <p>3. Intron end coordinate (1-indexed)</p> <p>4. Intron label from intronIC</p> <p>5. U12-type probability score (0-100); introns with scores > 95 were considered U12-type in the manuscript</p> <p>6. Strand</p>
ShareScore
48/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 20
- Reuse readiness
- 8
- Engagement
- 8