PharmaCoNER Silver Standard: Participant predictions in PharmaCoNER shared task
<p><strong>Introduction</strong></p> <p>Predictions in the test and background set of PharmaCoNER participants.</p> <p> </p> <p><strong>Zip structure</strong></p> <p>One directory per PharmaCoNER participant. Within each participant directory, there is one directory per run.</p> <p> </p> <p><strong>Corpus format description</strong></p> <p>For subtask 1 annotations are distributed in Brat format. See Brat webpage for more information <a href="https://brat.nlplab.org/standoff.html">https://brat.nlplab.org/standoff.html</a></p> <p>For subtask-2, codes are associated with each document are given in a TSV file with the following columns: </p> <pre>articleID code </pre> <p><br> <strong>Resources:</strong></p> <ul> <li><strong><a href="https://temu.bsc.es/pharmaconer/">Web</a></strong></li> <li><strong>Citation: </strong>A. G. Agirre, M. Marimon, A. Intxaurrondo, O. Rabal, M. Villegas, M. Krallinger, Pharmaconer: Pharmacological substances, compounds and proteins named entity recognition track, in: Proceedings of The 5th Workshop on BioNLP Open Shared Tasks, 2019, pp. 1–10.</li> <li><a href="https://doi.org/10.5281/zenodo.4270157"><strong>Gold Standard corpus</strong></a></li> <li><a href="https://doi.org/10.5281/zenodo.3763276"><strong>Annotation guidelines</strong></a></li> <li><a href="https://github.com/TeMU-BSC/PharmaCoNER-Tagger"><strong>PharmaCoNER tagger</strong></a></li> </ul> <p> </p> <p>All credit to PharmaCoNER participants. </p> <p>For further information, please visit <a href="https://temu.bsc.es/pharmaconer/">https://temu.bsc.es/pharmaconer/</a> or email us at encargo-pln-life@bsc.es</p> <p>Copyright (c) 2018 Secretaría de Estado para el Avance Digital (SEAD)</p>
ShareScore
40/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 4