MCMC simulation data for AutoGibbs.jl benchmarks
<p>Chains and diagnostic data for the test models of <a href="https://github.com/phipsgabler/AutoGibbs.jl">AutoGibbs.jl.</a> Includes four CSV files for each of the models: GMM, HMM, and IMM.</p> <p> </p> <p>Files are all in long format. The files for chains, diagnostics, and sampling times all contain "model", "discrete_algorithm" (AG or PG), "continuous_algorithm" (always HMC), "particles" (always 100), "data_size" (number of observations: 10, 25, or 50), and "repetition" (index of chain; there are 10 chains per parameter combination, except for HMC, there the benchmark has been killed somewhere after the eight chain). In addition to that, the sampling time files contain a column "samping_time" (in seconds), and the diagnostic files have columns "parameter" (name of the random variable), "diagnostic" (ESS or R_hat), and "value" with chain diagnostic values. Chain files have "parameter", "step", and "value" for the sampled values at each step of the chain.</p> <p> </p> <p>The compile time measurements consist just of columns "model", "data_size", "repetition", "compilation_time" (in seconds).</p> <p> </p> <p>Note that the "parameter" column in the HMM data has been manually adjusted; see the file plotting.jl in the AutoGibbs.jl repository.</p>
ShareScore
40/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 20
- Reuse readiness
- 8
- Engagement
- 0