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Rapid establishment of species barriers in plants compared to animals

<p><strong>fasta_sequences.zip: </strong>Plant datasets used for demographic inference in the "plants versus animals" comparison.<br>Each archive corresponds to a genus, with the exception of <em>Howea</em> and <em>Linospadix</em>, which are treated as a single dataset.<br>These archives contain at least one "<em>genus</em>_populations.fasta" file corresponding to the individual genotypes used for inferences.<br>Where required, there is also a "<em>genus</em>_reference.fasta" file corresponding to the reference used for read mapping.<br>All references used are coding sequences (CDS).</p> <p><strong>figures.zip:&nbsp;</strong>Figures of the article, produced by the script <em>scripts/figures_plants_animals.R</em> using data from <em>results/</em></p> <p><strong>results.zip:</strong> Include information about the different species pairs in plants and animals, such as the statistics used for demographic inferences, the results of these inferences, geographic distances, and the outcomes of the goodness-of-fit tests.</p> <p><strong>results_selfing_estimates_per_species.zip: </strong>Selfing rate estimates for surveyed plant species.</p> <p><strong>scripts.zip:</strong> R-script used to perform statistical analyses on data from the <em>results.zip</em> file and to generate the main and supplementary figures.</p> <p><strong>QuIBL_DILS.zip:</strong> Scripts, simulated datasets, and figures for the QuIBL and DILS comparison.</p> <p><strong>Auxiliary_Tables.ods: </strong>Auxiliary tables providing supplementary data and results supporting the analyses presented in the manuscript, including demographic inference statistics, selfing rate estimates, and geographic distance measurements</p> <p>&nbsp;</p> <p>&nbsp;</p> <p>&nbsp;</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
12
Harmonization
8
Access
16
Reuse readiness
0
Engagement
0

Topics

Dataset details

Repository
zenodo
Published
June 11, 2023
License
cc-by-4.0
DOI
10.5281/zenodo.8026401

Scored with release 0.9.0

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