Identifying Spatial Co-occurrence in Healthy and InflAmed tissues (ISCHIA)

<p>Integrated IBD scRNASeq reference: Seurat object and cell type markers.&nbsp;</p><p>Molecular Cartography (Resolve) data&nbsp;data of human colon samples. 6&nbsp;ulcerative colitis colon resections: 3&nbsp;inflamed, 3&nbsp;non-inflamed areas (4&nbsp;patients in total). Segmented object (Seurat), and imaging data used for figures: B2-1 and C1-2 (healthy samples), C2-1 and C1-4 (inflamed samples)&nbsp;</p><p>Visium (10X) spatial transcriptomics data of human colon samples. 4&nbsp;ulcerative colitis colon resections:&nbsp;2 inflamed, 2 non-inflamed areas (3 patients in total).&nbsp;</p><p>Supplementary Table 1: positively co-occurring ligands and receptors in composition class 5.</p><p>&nbsp;</p><p>&nbsp;</p>