Supplementary Information: RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity
<p><span><span>The Simulation_files folder contains initial coordinates, input files and output coordinates of the Molecular Dynamics (MD) simulations of wild type and mutants of the Apdp peptide in the ribosome ( region of 35 </span></span>Å around the peptide).</p> <p><span><span>The Uncharged_N-terminal_residues folder includes residue topologies (.rtp file) and hydrogen data bank (.hdb) of the uncharged terminal Alanine and Proline (used for modelling Ala134 and Pro134).</span></span></p> <p><span><span>The Figures folder contains rmsd, distances, rmsf values, and projections on the most dominant conformational modes sampled by the Ala 132 backbone atoms obtained from the MD trajectories.</span></span><span><br></span></p>
ShareScore
32/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0
Dataset details
- Repository
- zenodo
- Published
- December 22, 2023
- License
- cc-by-4.0
- DOI
- 10.5281/zenodo.10426361
Scored with release 0.9.0
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