Toy example for Decoil-viz - vizualization module for ecDNA reconstructions
<p>This zenodo entry is a toy example for the Decoil-viz, the visualization module for ecDNA reconstructions generated by Decoil method.</p> <ul> <li>Find Decoil-viz repository under <a href="https://github.com/madagiurgiu25/decoil-viz">https://github.com/madagiurgiu25/decoil-viz</a>.</li> <li>Learn how to reconstruct ecDNA structures using Decoil (<a href="https://github.com/madagiurgiu25/decoil-pre">https://github.com/madagiurgiu25/decoil-pre)</a></li> </ul> <p>Please cite the paper: Giurgiu et al. 2024. <em>Genome Research</em>. "Reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data using Decoil". <a href="https://genome.cshlp.org/content/early/2024/08/21/gr.279123.124">Doi: 10.1101/gr.279123.124</a></p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 20
- Reuse readiness
- 8
- Engagement
- 0