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Toy example for Decoil-viz - vizualization module for ecDNA reconstructions

<p>This zenodo entry is a toy example for the Decoil-viz, the visualization module for ecDNA reconstructions generated by Decoil method.</p> <ul> <li>Find Decoil-viz repository under&nbsp;<a href="https://github.com/madagiurgiu25/decoil-viz">https://github.com/madagiurgiu25/decoil-viz</a>.</li> <li>Learn how to reconstruct ecDNA structures using Decoil (<a href="https://github.com/madagiurgiu25/decoil-pre">https://github.com/madagiurgiu25/decoil-pre)</a></li> </ul> <p>Please cite the paper: Giurgiu et al. 2024. <em>Genome Research</em>. "Reconstructing extrachromosomal DNA structural heterogeneity from long-read sequencing data using Decoil".&nbsp;<a href="https://genome.cshlp.org/content/early/2024/08/21/gr.279123.124">Doi: 10.1101/gr.279123.124</a></p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
20
Reuse readiness
8
Engagement
0