Supplementary Materials for the manuscript "Inter-individual speed variation of bacteria dispersing on fungal highways"
<p>This repository includes all datasets used and created for the manuscript "Inter-individual speed variation of bacteria dispersal on fungal highways". </p> <p>----5 videos were used for producing the dispersal speed distribution of the RFP labelled Pseudomonas putida UWC1 cells:</p> <p>100x_rfp_2days***.gif</p> <p>----5 videos were used for producing the dispersal speed distribution of the GFP labelled Pseudomonas putida KT2440 cells:</p> <p>100x_gfp_2days***.gif</p> <p>----Data used for location tracking of the two videos shown in Figure 1:</p> <p>100x_rfp_2days028.nd2</p> <p>TrackMate capture of 100x_rfp_2days028.tif</p> <p>100x_gfp_2days005.nd2</p> <p>TrackMate capture of 100x_gfp_2days005.tif</p> <p>----5 Speed distribution raw data files for the RFP labelled cells:</p> <p>rfp_2days***_11fps_2_2movement.csv</p> <p>----5 Speed distribution raw data files for the GFP labelled cells:</p> <p>gfp_2days***_11fps_2_movement.csv</p> <p>----R script for calculating speed distribution of cells:</p> <p>speed calculation.R</p> <p>----Mathematica Notebook file for data visulization:</p> <p>HistCompare.nb</p> <p>----10 best fits of probability distribution functions and goodness-of-fit criteria analysis of the speed of RFP labelled cells:</p> <p>rfp-FitTable.csv</p> <p>----10 best fits of probability distribution functions and goodness-of-fit criteria analysis of the speed of GFP labelled cells:</p> <p>gfp-FitTable.csv</p>
ShareScore
32/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0