Tutorial data for NordTEMhub/ARTEMI Workshop, Three-Dimensional Electron Diffraction

<p>The data is used for NordTEMhub/ARTEMI Workshop, Three-Dimensional Electron Diffraction, 15-17 April 2024, Stockholm, Sweden.</p> <p><strong>A. Data information</strong></p> <p>There are<strong> two </strong>zip files<strong>:</strong></p> <p><em><strong>[1] Tutorial_data.zip</strong></em></p> <p>1) Part1_3_data_processing_1dataset:</p> <p>&nbsp; &nbsp; &nbsp;This folder includes 1 CAU-36 dataset for <strong>Part 1-3</strong> of the tutorial.</p> <p>2) Part4_batch_data_processing_8datasets:</p> <p>&nbsp; &nbsp; &nbsp;This folder contains 8 CAU-36 datasets for <strong>Part 4</strong> of the tutorial.</p> <p>3) Part5_bonus_Lysozyme_protein_47datasets:&nbsp; &nbsp;&nbsp;</p> <p>&nbsp; &nbsp; &nbsp;47 lysozyme datasets. The data will not be included in this tutorial.</p> <p><em><strong>[2] CAU-36only.zip</strong></em></p> <p>Only data for CAU-36</p> <p>1) Part1_3_data_processing_1dataset:</p> <p>&nbsp; &nbsp; &nbsp;This folder includes 1 CAU-36 dataset for <strong>Part 1-3</strong> of the tutorial.</p> <p>2) Part4_batch_data_processing_8datasets:</p> <p>&nbsp; &nbsp; &nbsp;This folder contains 8 CAU-36 datasets for <strong>Part 4</strong> of the tutorial.</p> <p><span>*If you have no interest in protein data, you can only download <strong>CAU-36only.zip</strong>.</span></p> <p>&nbsp;</p> <p><strong>B. Data collection&nbsp;</strong></p> <p>The cRED data of CAU-36 was collected with an ASI Timepix hybrid detector installed on a JEOL JEM-2100 (200 kV) microscope equipped with a LaB6 filament.</p> <p>&nbsp;</p> <table> <tbody> <tr> <td> <p>Sample</p> </td> <td> <p>CAU-36, MOF</p> </td> </tr> <tr> <td> <p>Related Publications</p> </td> <td> <p><em>Chem.: Eur. J.</em>, <strong>24</strong>, 2018</p> </td> </tr> <tr> <td> <p>TEM</p> </td> <td> <p>JEOL JEM-2100LaB6, 200 kV</p> </td> </tr> <tr> <td> <p>Camera</p> </td> <td> <p>ASI TimePix</p> </td> </tr> </tbody> </table> <p>&nbsp;</p> <p>The MicroED data of lysozyme was collected with an CetaD detector installed on a Titan krios Titan Krios G3i equipped with an autoloader. The data collection software was EPU-D.</p> <p>&nbsp;</p> <p><strong>B. Required data processing software&nbsp;</strong></p> <p><em>Information about RED:</em></p> <p>Wan. W. et. al. &ldquo;Three-dimensional rotation electron diffraction: software RED for automated data collection and data processing&rdquo;, <em>Journal of Applied Crystallography</em>, <strong>2013</strong></p> <p>Zhang. D. et. al. &ldquo;Collecting 3D electron diffraction data by the rotation method<em>&rdquo;, Zeitschrift f&uuml;r Kristallographie</em>, <strong>2010</strong></p> <p>Website: <a href="https://www.mmk.su.se/zou/electron-crystallography-software/rotation-electron-diffraction-red">https://www.mmk.su.se/zou/electron-crystallography-software/rotation-electron-diffraction-red</a></p> <p><em>Information about XDS:</em></p> <p>Kabsch. W. &ldquo;XDS&rdquo;, <em>ACTA CRYSTALLOGRAPHICA SECTION D</em>, 2010</p> <p>XDS Wiki: <a href="https://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/Main_Page">https://strucbio.biologie.uni-konstanz.de/xdswiki/index.php/Main_Page</a></p> <p><em>AutoXDSGUI:</em></p> <p><em>A homemade batch data processing software. Will be available in Zenodo or GitHub soon!</em></p> <p>&nbsp;</p> <p><strong>C. Structure determination software</strong></p> <p><em>Information about Shelx (including Shelxs, Shelxt and Shelxl) for CAU-36:</em></p> <p><a href="http://shelx.uni-ac.gwdg.de/SHELX/">http://shelx.uni-ac.gwdg.de/SHELX/</a></p> <p><em>Information about Phenix for protein:</em></p> <p><a href="http://shelx.uni-ac.gwdg.de/SHELX/">https://phenix-online.org/</a></p> <p><em>Information about Coot for protein:</em></p> <p>https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/</p> <p>&nbsp;</p> <p>&nbsp;</p>