Genome assembly and annotation for temperate coral Astrangia poculata

<p>Initial release of the genome assembly, gene prediction, and functional annotation for the temperate coral <em>Astrangia poculata.&nbsp;</em></p> <p>The genomic resources made available here are described in <a href="https://www.biorxiv.org/content/10.1101/2023.09.22.558704v1.full">Stankiewicz et al., 2023</a>. The files are as follows:</p> <p>&nbsp;</p> <p>Genome assembly:</p> <ul> <li>apoculata.genome.fasta.gz --unmasked version of the genome assembly</li> <li>apoculata.genome.masked.fasta.gz --masked version of the genome assembly</li> <li> <p><span>apoculata_circularized_mitogenome.fasta --circularized mitochondrial genome assembly</span></p> </li> </ul> <p>Annotation:</p> <ul> <li>apoculata_GeneAnnotation_combined.txt.gz: function annotation</li> <li>apoculata.gff3.gz: gene predictions in GFF3&nbsp;&nbsp;</li> <li>apoculata.gtf.gz: gene predictions in GTF&nbsp;&nbsp;</li> <li>apoculata_cds.fasta.gz: coding sequences&nbsp;</li> <li>apoculata_longest_trans_cds.fasta.gz: coding sequences filtered to just the longest translatable per gene&nbsp;&nbsp;</li> <li>apoculata_mrna.fasta.gz: mRNA sequences&nbsp;&nbsp;</li> <li>apoculata_proteins.fasta.gz: protein sequences</li> </ul>