Characterization of tumour heterogeneity through segmentation-free representation learning on multiplexed imaging data

<p>This is the data repository for Characterization of tumour heterogeneity through segmentation-free representation learning on multiplexed imaging data.</p> <p>Catalog:</p> <ol> <li>Intermediate data used in plotting: CANVAS_source_data.zip <ol> <li>Single cell monocyte data: monocyte.h5ad</li> <li>qPCR table: qPCR_1013.csv</li> <li>NanoString GeoMx cell composition: fig6b.csv</li> </ol> </li> <li>Pretrained CANVAS model: checkpoint-1999.pth</li> </ol> <p>The source IMC data is avaiable at: https://zenodo.org/records/7760826</p>