Relate-estimated coalescence rates and allele ages for European beef cattle

<h1>Overview</h1> <p>Coalescence rates and allele ages calculated for five beef cattle breeds (Charolais, Simmental, Limousin, Hereford, Angus) using Relate.</p> <p>We estimated the joint genealogy of 684 individuals, including both <em>Bos taurus</em> and <em>Bos indicus</em>, then extracted the embedded genealogy for the five cattle breeds and re-estimated the population size history and branch lengths.</p> <p>We extracted the embedded genealogy for each of the five beef cattle breeds, jointly estimated the population size history, and re-estimated the branch lengths.</p> <p>Please email bft990914@163.com for any queries.</p> <h1>Coalescence Rates and Allele Ages</h1> <p>The *.coal files record coalescence rates for each of the five cattle breeds.</p> <p>The gzipped files allele_ages_*.gz record allele ages for each of the five cattle breeds.</p>