Spike-MD Data for "CryoBench: Diverse and challenging datasets for the heterogeneity problem in cryo-EM"

<p>A synthetic cryo-EM dataset with heterogeneity from a molecular dynamics simulation and ground truth atomic models, poses, labels, mask, and consensus volume:</p> <ul> <li>Spike-MD: 100k particle images (256x256, 1.5A/pix) of SARS-CoV-2 spike protein with conformations sampled from a molecular dynamics simulation from Wiecz&oacute;r et al. (2023)</li> <li>sampled_pdbs.xtc: atomic models stitched into a trajectory</li> <li>seed_structure.pdb: initial seed structure for .xtc trajectory</li> </ul>