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Monod supporting data

<p>The release of the Monod package (<a href="https://github.com/pachterlab/monod">https://github.com/pachterlab/monod</a>) is accompanied by the analysis of several 10X and seqFISH+ datasets to identify trends in transcriptional regulation mechanisms and parameters. This data deposit contains the copy-number data as well as the results of the Monod inference pipeline.</p> <p>monod_examples_loom_files.tar.gz: raw loom files generated by pseudoaligning Desai, Allen, May&egrave;re, Hwang, Lu, Takei, Khateb and 10x datasets.</p> <p>monod_examples_fit_results.tar.gz: search results and figures from fitting models to the datasets.</p> <p>monod_examples.zip: a copy of the project repository (<a href="https://github.com/pachterlab/monod_examples">https://github.com/pachterlab/monod_examples</a>).</p>

ShareScore

40/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
12
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0

Topics

Dataset details

Repository
zenodo
Published
June 11, 2022
License
cc-by-4.0
DOI
10.5281/zenodo.6596871

Scored with release 0.9.0

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