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Paulinella micropore KR01 manually corrected gene models from selected KEGG pathways

<p>Major results files produced from the analysis of the nucleotide biosynthesis, DNA replication, and histidine metabolism pathways in <em>Paulinella micropore</em> KR01.</p> <p>&nbsp;</p> <p><code>manually_corrected_genes.genome.gff3.gz</code></p> <p>Gene models (in GFF3 format) of manually corrected <em>P. micropora</em> KR01 genes.</p> <p>&nbsp;</p> <p><code>manually_corrected_genes.cds.fna.gz</code></p> <p>CDS of manually corrected <em>P. micropora</em> KR01 genes.</p> <p>&nbsp;</p> <p><code>manually_corrected_genes.pep.faa.gz</code></p> <p>Protein sequences of manually corrected <em>P. micropora</em> KR01 genes.</p> <p>&nbsp;</p> <p><code>fasta.tar.gz</code></p> <p>Sequences used for phylogenetic analysis of major KEGG Orthologs from the nucleotide biosynthesis, DNA replication, and histidine metabolism pathways.</p> <p>&nbsp;</p> <p><code>aln.tar.gz</code></p> <p>Alignments produced by <code>mafft</code> v7.453 (&lsquo;--localpair --maxiterate 1000&rsquo;) that were used for phylogenetic analysis of the major KEGG Orthologs.</p> <p>&nbsp;</p> <p><code>tree.tar.gz</code></p> <p>Consensus trees produced by <code>iqtree</code> v1.6.12 (&lsquo;-m LG+R7 -bb 2000 -quiet&rsquo;) that were used for phylogenetic analysis of the major KEGG Orthologs.</p>

ShareScore

40/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
4

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