Host and pathogen gene expression profiles in Necrotizing Soft Tissue Infections

<p>Data underlying the article</p> <p><strong>Analysis of host-pathogen gene association networks reveals patient-specific response to streptococcal and poly-microbial necrotizing soft tissue infections</strong></p> <p>Sanjeevan Jahagirdar¹, Lorna Morris², Nirupama Benis³, Oddvar Oppegaard⁴, Mattias Svenson⁵,Ole Hyldegaard⁶, Steinar Skrede^4,7, Anna Norrby-Teglund⁵, INFECT Study group, Vitor A. P. Martins dos Santos^1,2, Edoardo Saccenti^1*</p> <p>^Contains</p> <p>Data described in 4.3.2 Sample Selection and in Figure 6:</p> <p>INFECT_DualRNASeq_norm_counts_Human.txt&nbsp; Normalised counts from Kallisto mapping to GRCh38 (release 91) for 81 NSTI patients</p> <p>INFECT_DualRNASeq_relative_abundance_Bacteria.txt Relative abundance for all species from HumanN2 mapping for 81 NSTI patients</p> <p>BStrep_filtered_D1 - INFECT_DualRNASeq_relative_abundance_Bacteria.txt filtered for samples classified as Streptococcal from Th&auml;nert <em>et al </em>(2019) taken on the day of admission (day 1).</p> <p>BPoly_filtered_D1 - INFECT_DualRNASeq_relative_abundance_Bacteria.txt filtered for samples classified as polymicrobial from Th&auml;nert <em>et al </em>(2019) taken on the day of admission (day 1).</p> <p>HStrep_filtered_D1 -&nbsp;INFECT_DualRNASeq_norm_counts_Human.txt filtered for samples classified as Streptococcal from Th&auml;nert <em>et al </em>(2019) taken on the day of admission (day 1).</p> <p>HPoly_filtered_D1 -&nbsp;INFECT_DualRNASeq_norm_counts_Human.txt filtered for samples classified as polymicrobial from Th&auml;nert <em>et al </em>(2019) taken on the day of admission (day 1).</p>