Skip to main content
zenodoopen

Copper binding leads to increased dynamics in the regulatory N-terminal domain of full-length human copper transporter ATP7B

<p>Dataset from article &quot;Copper binding leads to increased dynamics in the regulatory N-terminal domain of full-length human copper transporter ATP7B&quot;</p> <p>Contains simulation input files and reduced trajectories.&nbsp;</p> <p>The files are sorted into four folders: reA_apo, reA_holo, reB_apo, reB_holo. Each folder contains the following (types of) files:</p> <p>Topology file:&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;topol.top<br> Index file:&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;index.ndx<br> Production mdp files for each replica: &nbsp;&nbsp; &nbsp;production_rep{i}.mdp<br> Starting structures as .gro files:&nbsp; &nbsp; &nbsp; &nbsp; &nbsp; &nbsp;&nbsp; &nbsp;ATP7B_E2_re{A/B}_{apo/holo}_rep{i}_start.gro<br> 10 ns step trajectories in .xtc format:&nbsp;&nbsp; &nbsp; &nbsp;ATP7B_E2_re{A/B}_{apo/holo}_rep{i}_trajectory.xtc<br> Folder with equilibration restraints:&nbsp; &nbsp; &nbsp; &nbsp; &nbsp;restraints<br> Folder with topology and forcefield:&nbsp; &nbsp; &nbsp; &nbsp; toppar</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
8
Engagement
4

Dataset details

Repository
zenodo
Published
July 26, 2022
License
cc-by-4.0
DOI
10.5281/zenodo.6412102

Scored with release 0.9.0

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.