Table 2 from Efficient Substructure Searching of Large Chemical Libraries: The ABCD Chemical Cartridge
<p>These 46 SMARTS queries come from Table 2 of:</p> <p> Dimitris K. Agrafiotis, Victor S. Lobanov, Maxim Shemanarev,<br> Dmitrii N. Rassokhin, Sergei Izrailev, Edward P. Jaeger, Simson<br> Alex, and Michael Farnum,<br> Efficient Substructure Searching of Large Chemical Libraries: The<br> ABCD Chemical Cartridge,<br> Journal of Chemical Information and Modeling 2011 51 (12), 3113-3130<br> <a href="https://doi.org/10.1021/ci200413e">https://doi.org/10.1021/ci200413e</a></p> <p>The SMARTS queries are in Table 2 (pages 3122-3123). A copy of the original table is in 10.1021_ci200413e_Table_2.pdf .</p> <p>The LibreOffice spreadsheet file 10.1021_ci200413e.ods contains three worksheets.</p> <p>- The "Overview" sheet contains a summary of the data set.</p> <p>- The "Table 2" sheet contains the table data.</p> <p>- The "ID map" sheet contains a mapping from the labels used in Agrafiotis et al. to the labels used in the original papers.</p> <p>This dataset is derived from two other data sets:</p> <p> Chemical Substructure Search in SQL<br> Adel Golovin and Kim Henrick<br> Journal of Chemical Information and Modeling 2009 49 (1), 22-27<br> https://doi.org/10.1021/ci8003013<br> See also doi:10.5281/zenodo.7116311</p> <p> Martin G. Hicks and Clemens Jochum<br> Substructure search systems. 1. Performance comparison of the MACCS, DARC, HTSS,<br> CAS Registry MVSSS, and S4 substructure search systems<br> Journal of Chemical Information and Computer Sciences 1990 30 (2), 191-199<br> https://doi.org/10.1021/ci00066a018<br> See also doi:10.5281/zenodo.7116311</p> <p>See the README for full details.</p>
ShareScore
28/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 4
- Engagement
- 0
Dataset details
- Repository
- zenodo
- Published
- September 26, 2022
- License
- cc-by-4.0
- DOI
- 10.5281/zenodo.7116325
Scored with release 0.9.0
ScienceDex for faculty
Your academic CV and NIH biosketch
Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.