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LMAS Supplemental Material

<p><a href="https://github.com/cimendes/LMAS">LMAS</a>&nbsp;is an automated workflow enabling the benchmarking of traditional and metagenomic prokaryotic de novo assembly software using defined mock communities.</p> <p>As proof of concept,&nbsp;the eight bacterial genomes and four plasmids, in tripled form, of the ZymoBIOMICS Microbial Community Standards are made available to be used as&nbsp;reference. Simulated raw sequence data of the mock communities with evenly distributed reads, generated from the reference genomes, with and without error, were obtained with&nbsp;<a href="https://github.com/HadrienG/InSilicoSeq">inSilicoSeq</a>.</p> <p>Project repository:&nbsp;<a href="https://github.com/cimendes/LMAS">https://github.com/cimendes/LMAS</a></p>

ShareScore

32/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0

Dataset details

Repository
zenodo
Published
June 7, 2022
License
cc-zero
DOI
10.5281/zenodo.6623457

Scored with release 0.9.0

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