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MD simulation trajectory of a POPC/POPS (4:1) bilayer with 715mM CaCl2, Berger force field for lipids, scaled charges for Ca2+ and Cl-

<p>MD simulation trajectory of a POPC/POPS (4:1) bilayer with 715 mM CaCl2 (104 POPC, 24 POPS, 26 POPS, 4306 WAT, 72 Ca2+, 112 Cl-). Additional Ca2+ cations added to neutralize the negative charge of POPS (leading to total Ca2+ concentration of 919 mM). Berger force field for lipids, scaled charges employed for calcium and chloride ions. Gromacs 4.5.5, T=310K, 300 ns trajectories were calculated with the last 100 ns stored here.</p> <p>Used in (see therein also a detailed description of ion scaling):</p> <p>A. Melcrova, S. Pokorna, S. Pullanchery, M. Kohagen, P. Jurkiewicz, M. Hof, P. Jungwirth, P. S. Cremer, L. Cwiklik, The complex nature of calcium cation interactions with phospholipid bilayers<br> Scientific Reports 2016, 6, 38035.<br> DOI: 10.1038/srep38035</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
8
Access
16
Reuse readiness
8
Engagement
0