Demo Live Cell Imaging Dataset for PetaKit5D
<p>Demo dataset for PetaKit5D (<a href="https://github.com/abcucberkeley/LLSM5DTools">https://github.com/abcucberkeley/PetaKit5D</a>). </p> <p>The dataset is for the large field of view live cell imaging of LLC-PK1 cells of nuclei and endoplasmic reticulum (ER). It contains two time points with two channels. Each time point and channel contains 4 volumetric tiles. Some demos in PetaKit5D use this dataset to demonstrate the usage.</p> <p>Please cite our paper (<a href="https://doi.org/10.1101/2023.12.31.573734">https://doi.org/10.1101/2023.12.31.573734</a>) if you use this dataset in your research:</p> <p><code>Xiongtao Ruan, Matthew Mueller, Gaoxiang Liu, Frederik Görlitz, Tian-Ming Fu, Daniel E. Milkie, Joshua L. Lillvis, Alexander Kuhn, Chu Yi Aaron Herr, Wilmene Hercule, Marc Nienhaus, Alison N. Killilea, Eric Betzig, Srigokul Upadhyayula. Image processing tools for petabyte-scale light sheet microscopy data. bioRxiv 2023.12.31.573734; doi: <a href="https://doi.org/10.1101/2023.12.31.573734">https://doi.org/10.1101/2023.12.31.573734</a></code></p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 8
- Access
- 12
- Reuse readiness
- 8
- Engagement
- 4
ScienceDex for faculty
Your academic CV and NIH biosketch
Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.