Skip to main content
zenodoopen

Demo Live Cell Imaging Dataset for PetaKit5D

<p>Demo dataset for PetaKit5D (<a href="https://github.com/abcucberkeley/LLSM5DTools">https://github.com/abcucberkeley/PetaKit5D</a>).&nbsp;</p> <p>The dataset is for the large field of view live cell imaging of LLC-PK1 cells of nuclei and endoplasmic reticulum (ER). It contains two time points with two channels. Each time point and channel contains 4 volumetric tiles. Some demos in PetaKit5D use this dataset to demonstrate the usage.</p> <p>Please cite our paper (<a href="https://doi.org/10.1101/2023.12.31.573734">https://doi.org/10.1101/2023.12.31.573734</a>) if you use this dataset in your research:</p> <p><code>Xiongtao&nbsp;Ruan,&nbsp;Matthew&nbsp;Mueller,&nbsp;Gaoxiang&nbsp;Liu,&nbsp;Frederik&nbsp;G&ouml;rlitz,&nbsp;Tian-Ming&nbsp;Fu,&nbsp;Daniel E.&nbsp;Milkie,&nbsp;Joshua L.&nbsp;Lillvis,&nbsp;Alexander&nbsp;Kuhn,&nbsp;Chu Yi Aaron&nbsp;Herr,&nbsp;Wilmene&nbsp;Hercule,&nbsp;Marc&nbsp;Nienhaus,&nbsp;Alison N.&nbsp;Killilea,&nbsp;Eric&nbsp;Betzig,&nbsp;Srigokul&nbsp;Upadhyayula. Image processing tools for petabyte-scale light sheet microscopy data. bioRxiv 2023.12.31.573734; doi: <a href="https://doi.org/10.1101/2023.12.31.573734">https://doi.org/10.1101/2023.12.31.573734</a></code></p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
8
Access
12
Reuse readiness
8
Engagement
4

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.