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HoVer-NeXt: A Fast Nuclei Segmentation and Classification Pipeline for Next Generation Histopathology - Datasets

<p>This repository contains training and validation data for</p> <p><strong>HoVer-NeXt: A Fast Nuclei Segmentation and Classification Pipeline for Next Generation Histopathology&nbsp;</strong></p> <p><strong>Accepted for Oral Presentation at MIDL2024: <a href="https://openreview.net/pdf?id=3vmB43oqIO">https://openreview.net/pdf?id=3vmB43oqIO</a>&nbsp;<br></strong></p> <p><strong>More information and code are available at <a href="https://github.com/digitalpathologybern/hover_next_inference" target="_blank" rel="noopener">https://github.com/digitalpathologybern/hover_next_inference</a></strong></p> <p>Modified Lizard dataset to include mitosis (lizard_mitosis.zip), mitosis dataset (mitosis_ds.zip) and a holdout eosinophil validation set (eos_eval.zip)</p> <p>mitosis_ds.zip also contains the hold-out H&amp;E mitosis test set.</p> <p>The original lizard dataset was createdy by Simon Graham et al. and was shared under CC BY-NC-SA 4.0. The tile-based dataset can be downloaded from <a href="https://conic-challenge.grand-challenge.org/Data/">https://conic-challenge.grand-challenge.org/Data/</a> after registering for the challenge. We modify the dataset by including an additional mitosis class, however note that there are a number of mitosis which are still not (correctly annotated).</p>

ShareScore

32/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
8
Access
12
Reuse readiness
8
Engagement
0