Introduction to bulk RNAseq analysis: supplementary material

<p><strong>Vampirium setup</strong></p><p>This archive contains materials (datasets, exercises and slides, etc) used&nbsp;for the Introduction to bulk RNAseq analysis workshop taught at the University of Copenhagen by the Center for Health Data Science (HeaDS). The course repo can be found on <a href="https://github.com/hds-sandbox/bulk_RNAseq_course">Github</a>:</p><p>Assignments.zip contains exercises for the preprocessing part of the course, like&nbsp;fastqc and multiqc examples of bulk RNAseq experiments</p><p>Data.zip contains count matrices (both traditional counts and salmon pseudocounts), as well as sample metadata (samplesheet.csv) and backup results from the preprocessing pipeline.</p><p>Notes.zip contains supplementary materials such as extra pdfs for more information on bulk RNAseq technology.</p><p>Slides.zip contains all the slides used in the workshop.</p><p>raw_reads.zip contains the raw reads from the bulk RNAseq experiment (<a href="https://doi.org/10.1016/j.celrep.2014.10.054">10.1016/j.celrep.2014.10.054</a>) used in this course.</p>