twist_panviral_masking

<p>Kraken2 database for twist panviral. 1232 viruses (1232 accession numbers corresponding to 516 unique taxons)</p> <p>Note that there were unmapped accession numbers. We had to add those seqid to taxon mapping in the seqid2tax file of the library before building it.</p> <p>&nbsp; &nbsp;NC_027201 taxon:11587<br>&nbsp; &nbsp;NC_027203 taxon:11587<br>&nbsp; &nbsp;NC_028101 replaced by NC_012042 taxon is 573977<br>&nbsp; &nbsp;NC_006947 obsolete according to NCBI taxon is 64287<br>&nbsp; &nbsp;NC_027202 taxon: 11587<br>&nbsp; &nbsp;NC_004355 taxon: 172148<br>&nbsp; &nbsp;NC_001347 taxon: 10359<br>&nbsp; &nbsp;NC_002617 139270<br>&nbsp; &nbsp;NC_004148 162145</p> <p>&nbsp;</p> <p>masking option was used and otherise default parameters of the kraken2 build command.</p>