Skip to main content
zenodoopen

Nanostring GeoMx DSP data for TNBC Samples_ M-712Baylor

<div> <div> <div> <div> <p>Gene expression analysis using the GeoMX DSP system (NanoString) was conducted to profile 57 FFPE TNBC tissues from self-reported 26 BA and 31 WA patients. We examined the transcriptome of these samples using the GeoMX Human Whole Transcriptome Atlas (WTA), which measures approximately 18,000 protein-coding genes. The GeoMX DSP analysis involved staining the slides with two morphology markers&mdash;Pan Cytokeratin (PanCK) to identify tumor cells, and CD45 to identify immune cells&mdash;along with a nuclear stain (DAPI).</p> </div> </div> </div> </div> <div> <div> <div>&nbsp;</div> </div> </div>

ShareScore

24/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
0
Engagement
0