Nanostring GeoMx DSP data for TNBC Samples_ M-712Baylor
<div> <div> <div> <div> <p>Gene expression analysis using the GeoMX DSP system (NanoString) was conducted to profile 57 FFPE TNBC tissues from self-reported 26 BA and 31 WA patients. We examined the transcriptome of these samples using the GeoMX Human Whole Transcriptome Atlas (WTA), which measures approximately 18,000 protein-coding genes. The GeoMX DSP analysis involved staining the slides with two morphology markers—Pan Cytokeratin (PanCK) to identify tumor cells, and CD45 to identify immune cells—along with a nuclear stain (DAPI).</p> </div> </div> </div> </div> <div> <div> <div> </div> </div> </div>
ShareScore
24/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 0
- Engagement
- 0