Strong pairwise interactions do not drive interactions in a plant leaf associated microbial community
<p>Illumina amplicon sequencing of 16S and ITS2 regions of the SynCom on solid medium was performed for the investigation of the community composition <em>in vitro (</em>raw data: Metadata_amplicon_sequencing_for_metabolomics_syncom_only). <em>In planta</em> amplicon sequencing was used to analyse the effect of pseudobactin on the SynCom composition on plant leaves(raw data: Metadata_amplicon_sequencing_Pseudobactin_on_plant.xlsx). </p> <p>Correlation networks were created based on co-abundances of epiphytic microbiome members of the <em>A. thaliana </em>leaf. Data used for the analysis was collected by amplicon sequencing of 16S, ITS and 18S regions from <em>A. thaliana</em> plants sampled around Tübingen (Mahmoudi <em>et al</em>., 2023). A workflow on how the data was processed can be found in the readme file within the Microbial_Networks.zip file.</p>
ShareScore
32/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 4
- Harmonization
- 4
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 0