Bacterial cell surface characterization by phage display coupled to high-throughput sequencing

<p>This record contains the processed high-throughput sequencing data from the manuscript "Bacterial cell surface characterization by phage display coupled to high-throughput sequencing." Data was generated using the <a href="https://github.com/caseygrun/phage-seq">Snakemake workflows and Jupyter notebooks in this repository</a> and is intended to be analyzed further using the notebooks in that repository</p> <p>Each tarball within this record, when expanded, populates the <code>results</code>&nbsp;and&nbsp;<code>intermediate</code> directories of one of those workflows: <code>alpaca-library</code> ,<code>panning-small</code>, <code>panning-massive</code>, or <code>panning-extended</code>. Clone the <a href="https://github.com/caseygrun/phage-seq"><code>phage-seq</code> repository</a>, then download one or more of these tarballs to the corresponding directory of that directory. For example:</p> <blockquote> <pre><code>git clone https://github.com/caseygrun/phage-seq.git cd panning-extended wget https://zenodo.org/records/11246658/files/panning-extended-results.tar.gz tar vzxf panning-extended-results.tar.gz</code></pre> </blockquote> <p>More detailed instructions are included in the README for the <a href="https://github.com/caseygrun/phage-seq"><code>phage-seq</code> repository</a>.</p>