Adapter sequences used for trimming of genomic sequences in the assembly of the Northern Spotted Owl (<i>Strix occidentalis caurina</i>) genome assembly version 1.0

<p>These files provide the sequences of the adapters used in the construction of the&nbsp;genomic libraries Hanna et al. (2017a) sequenced and used to assemble&nbsp;the Northern Spotted Owl (<em>Strix occidentalis caurina</em>) genome assembly version 1.0 (Hanna et al. 2017b). These files also contain&nbsp;relevant supplemental adapter sequences from the adapter files&nbsp;included with Trimmomatic version 0.36&nbsp;(Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011595_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011595. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011596_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011596. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011597_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011597. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011614_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011614. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;and &quot;NexteraPE-PE.fa&quot; files distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011615_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011615. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;file distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p> <p><strong>SRR4011616_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011616. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;file distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).<br> &nbsp;<br> <strong>SRR4011617_adapters.fa</strong> : This FASTA format file contains the full length&nbsp;sequences of the adapters Hanna et al. (2017a) used to construct the genomic library they sequenced to produced the data uploaded as&nbsp;NCBI Sequence Read Archive (SRA) run accession SRR4011617. I have also included the partial adapter sequences provided in the &quot;TruSeq3-PE-2.fa&quot;&nbsp;file distributed with Trimmomatic version&nbsp;0.36 (Bolger, Lohse &amp; Usadel, 2014).</p>