Data and results for the paper "On the Rank-Distance Median of 3 Permutations"

<p>The uploaded files contain:</p> <p>(1) the list of 13 real genomes of the campanulaceae family (in &quot;signed gene permutation&quot; format);</p> <p>(2) the raw input files obtained from simulating triplets using SCJ and DCJ operations (the folder name and the first number in the filename indicates the size of the genome; the second number in the filename indicates the rearrangement rate r;&nbsp;the third number in the filename indicates the iteration, from 0 to 9); each text file contains the three genomic matrices (the rawest data is in &quot;Matlab files&quot;);</p> <p>(3) the results of running our algorithms on the data obtained from simulating triplets using SCJ and DCJ operations (in .RData files); the Results element&nbsp;contains, for each size above, the performance of the algorithms on inputs of that size as well as the outputs of the algorithm for finding the median being tested; the Times element contains 10 groups of 5 times produced by timing the algorihtm on the inputs of the given size.</p>