zenodoopen
A Simulated Heterozygous Diploid Genome for Third-gen Sequencing, Assembly, and Curation
<p>A simulated heterozygous diploid genome based on <em>Saccharomyces</em> <em>cerevisiae</em>, and <em>S. paradoxus</em> homologous chromosomes.</p> <p>Simulated PacBio subreads were generated from both parent haplomes and mixed together. A phased assembly was produced using FALCON assembler and FALCON Unzip (doi:10.1038/nmeth.4035). This dataset and assembly were then used to validate the Purge Haplotigs pipeline (https://bitbucket.org/mroachawri/purge_haplotigs). See workflow.sh for commands, comments and file descriptions.</p>
ShareScore
44/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 20
- Reuse readiness
- 8
- Engagement
- 4