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A Simulated Heterozygous Diploid Genome for Third-gen Sequencing, Assembly, and Curation

<p>A simulated heterozygous diploid genome based on <em>Saccharomyces</em> <em>cerevisiae</em>, and <em>S. paradoxus</em> homologous chromosomes.</p> <p>Simulated PacBio subreads were generated from both parent haplomes and mixed together. A phased assembly was produced using FALCON assembler and FALCON Unzip (doi:10.1038/nmeth.4035). This dataset and assembly were then used to validate the Purge Haplotigs pipeline (https://bitbucket.org/mroachawri/purge_haplotigs). See workflow.sh for commands, comments and file descriptions.</p>

ShareScore

44/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
20
Reuse readiness
8
Engagement
4

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