Modeling of the Nup84 subcomplex of the Nuclear Pore Complex
<p>These scripts demonstrate the use of IMP, MODELLER, and PMI in the modeling of the Nup84 complex using 286 DSS/EDC chemical cross-links and an electron microscopy (EM) 2D class average.</p> <p>First, MODELLER is used to generate initial structures for the individual components in the Nup84 complex. Then, IMP is used to model these components using DSS/EDC crosslinks and the electron microscopy 2D class average for the entire Nup84 complex.</p> <p>For more information about how to reproduce this modeling, see <a href="https://salilab.org/nup84">the Sali lab website</a> or the README file.</p>
ShareScore
36/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 4
- Access
- 12
- Reuse readiness
- 8
- Engagement
- 4
Topics
Dataset details
- Repository
- zenodo
- Published
- August 25, 2014
- License
- lgpl-2.1
- DOI
- 10.5281/zenodo.596089
Scored with release 0.9.0
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