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GENCODE mouse & human transcript to gene files for txImport

<p>GENCODE data downloaded for human (GRCh38p12 v28)&nbsp;and mouse (GRCm38p6 vM18). For each organism (human=v28, mouse=vM18), there is an R script with the commands necessary to generate the tx2gene CSV that can be read in and used with the tximport Bioconductor package for summarizing transcript abundances to the gene level.</p> <p><strong>gencode.v28 = human</strong></p> <p><strong>gencode.vM18 = mouse</strong></p> <p>&nbsp;</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
20
Reuse readiness
8
Engagement
0