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Bamfiles DNA sequencing reads HCT strain Fo1A and Fo2A

<p>Reads obtained from DNA sequencing of two strains resulting from the horizontal chromosome transfer experiment described in [doi: 10.1038/nature08850] and submitted to ENA [PRJEB29294] . For each strains two paired-end libraries were generated, one with ifragment length of about 170 bp and one with fragmentlength of 500 bp. They were first mapped to the genome of Fo47, unmapped reads were subsequently mapped to the genome of Fol4287, as described in [doi: 10.1101/465070]. Putative PCR duplicates were removed using Picard tools and resulting bamfiles (one for the 170 fragment library and one for the 500 bp fragment library) were merged.</p> <p>These files are the resulting bamfiles.</p> <p>Fo1A_L170_L500.unmapped_to_Fo47illumina.Fol4287broad.bowtie2.sorted_dedup.bam (one chromosome: chr 14)</p> <p>Fo2A_L170_L500.unmapped_to_Fo47illumina.Fol4287broad.bowtie2.sorted_dedup.bam (two chromosomes: chr 14 + small chromosome)</p>

ShareScore

32/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
4
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0

Dataset details

Repository
zenodo
Published
November 7, 2018
License
cc-by-4.0
DOI
10.5281/zenodo.1479942

Scored with release 0.9.0

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