Test data for running snakePipes : ChIP-seq workflow

<p><strong>Test files for running snakePipes workflows</strong></p> <p><strong>snakePipes</strong> are pipelines built using snakemake and python for the analysis of epigenomic datasets. Please refer to <a href="https://snakepipes.readthedocs.io/en/latest/">this link</a>&nbsp;for further information on snakePipes.</p> <p>This folder contains test files that can be used to run the ChIP-seq workflow under snakePipes. To test the workflow, follow the following steps :&nbsp;</p> <ul> <li>Download or prepare genome fasta, indices and annotations for human (<strong>hg38</strong>) genome.</li> <li>Download and install snakePipes via `conda create -n snakePipes -c mpi-ie -c bioconda -c conda-forge snakePipes`</li> <li>Update <a href="https://snakepipes.readthedocs.io/en/latest/content/running_snakePipes.html#genome-configuration-file">Genome configuration file</a>&nbsp;with path to indices and annotations.</li> <li>Move to this repository and run the example <strong>command.sh</strong></li> </ul>