Skip to main content
zenodoopen

Simulation POPC_512_NaCl_150mM_310K membrane

<p><strong>Title publication: </strong><em>A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino Acid Transporter Interaction</em></p> <p><strong>Year publication: </strong>2018</p> <p><strong>DOI publication: </strong>10.1021/acscentsci.7b00582</p> <p><strong>Description:</strong> Simulation POPC membrane using charmm36 at 310K.</p> <p><strong>MD engine:</strong> 2016.1<br> <br> &nbsp;</p> <p><strong>Force field</strong>: charmm36</p> <p><strong>Temperature</strong>: 310 K</p> <p><strong>Pressure:</strong> 1 bar</p> <p><strong>Simulation time</strong>: 4200 ns</p> <p><strong>Saving frequency</strong>: 100 ps</p> <p><strong>Molecular content</strong>:</p> <p>POPC&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; 512<br> water&nbsp;&nbsp;&nbsp;&nbsp; 20480<br> Cl-&nbsp;&nbsp;&nbsp;&nbsp;&nbsp; &nbsp; &nbsp; 55<br> Na+&nbsp; &nbsp; &nbsp;&nbsp;&nbsp; 55</p> <p><strong>Other information:</strong><br> &nbsp; * Center of mass motion removed independently for bilayer and water+ions<br> &nbsp; * 01-* are the merged files.<br> &nbsp; * 02-* are the original simulation files. So do not concatenate 02 and 01 files.</p>

ShareScore

36/100

Overall dataset sharing score

Score breakdown

These five areas show where the dataset supports — or may limit — practical reuse.

Stewardship
8
Harmonization
4
Access
16
Reuse readiness
8
Engagement
0

Topics

Dataset details

Repository
zenodo
Published
May 27, 2019
License
cc-by-4.0
DOI
10.5281/zenodo.3228176

Scored with release 0.9.0

ScienceDex for faculty

Your academic CV and NIH biosketch

Make your CV in your school's format and your NIH biosketch from it, then download both as Word files.