Homologous membrane protein structures (HOMEP) dataset version v2
<p><strong>Protein structures from the dataset of Homologous MEmbrane Protein structures (HOMEP)</strong> version v2 created in 2010, published in 2013. A more automated version of HOMEP v1: <a href="https://doi.org/10.5281/zenodo.2646534">10.5281/zenodo.2646534</a><br> </p> <p><strong>Table 1</strong> = List of protein databank structure entries<br> From Stamm et al, PLOS One 2013, <a href="https://www.ncbi.nlm.nih.gov/pubmed/23469223">https://www.ncbi.nlm.nih.gov/pubmed/23469223</a>, Supplementary Table 1, with the following entries:<br> Family grouping, Protein databank identifier, Name, Source organism, Resolution (Å)</p> <p> </p> <p><strong>Table 2</strong> = List of pairs of structures<br> From Stamm et al, PLOS One 2013, <a href="https://www.ncbi.nlm.nih.gov/pubmed/23469223">https://www.ncbi.nlm.nih.gov/pubmed/23469223</a>, Supplementary Table 2, with the following entries:<br> Family grouping, PDB code for first structure, Chain ID from PDB1, PDB for second structure, Chain ID from PDB2, protein structural difference (PSD), % sequence identity</p> <p> </p> <p><strong>File S2 HOMEP2 Dataset.tar.gz</strong> = Protein databank format files (PDB) are attached in the Dataset tar zipped file, organized by family. From Stamm et al, PLOS One 2013, <a href="https://www.ncbi.nlm.nih.gov/pubmed/23469223">https://www.ncbi.nlm.nih.gov/pubmed/23469223</a>, Supplementary dataset.</p>
ShareScore
48/100
Overall dataset sharing score
Score breakdown
These five areas show where the dataset supports — or may limit — practical reuse.
- Stewardship
- 8
- Harmonization
- 8
- Access
- 16
- Reuse readiness
- 8
- Engagement
- 8